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Establishment of prognostic model of bladder cancer based on apoptosis-related genes, in which P4HB promotes BLCA progression

BACKGROUND: A variety of apoptosis genes have been confirmed to be related to the occurrence and development of bladder cancer patients, but few studies have paid attention to their significance in the prognosis of bladder cancer. Therefore, this study explored the value of apoptosis-related genes i...

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Autores principales: Zou, Zhenhai, Li, Zhong, Sun, Wei, Gao, Wuyue, Liu, Beibei, Liu, Jianmin, Guo, Yuanyuan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10577908/
https://www.ncbi.nlm.nih.gov/pubmed/37845668
http://dx.doi.org/10.1186/s12894-023-01331-5
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author Zou, Zhenhai
Li, Zhong
Sun, Wei
Gao, Wuyue
Liu, Beibei
Liu, Jianmin
Guo, Yuanyuan
author_facet Zou, Zhenhai
Li, Zhong
Sun, Wei
Gao, Wuyue
Liu, Beibei
Liu, Jianmin
Guo, Yuanyuan
author_sort Zou, Zhenhai
collection PubMed
description BACKGROUND: A variety of apoptosis genes have been confirmed to be related to the occurrence and development of bladder cancer patients, but few studies have paid attention to their significance in the prognosis of bladder cancer. Therefore, this study explored the value of apoptosis-related genes in the prognosis of BLCA by using the data in TCGA database. METHODS: We downloaded the mRNA expression profiles and corresponding clinical data of bladder cancer patients from TCGA database, and obtained 2411 apoptosis-related genes from Deathbase database. Screening out differentially expressed apoptosis-related genes. Cox regression was used to determine the prognostic value of apoptosis-related genes, and then a prognostic risk model was developed. A nomogram based on risk model was constructed to predict the prognosis of bladder cancer patients. At the same time, immune infiltration correlation analysis of genes in the prognosis model. RESULTS: A prognostic model composed of 12 apoptosis-related genes was constructed. According to the risk score calculated by the model, patients were divided into high-risk group and low-risk group. There are significant differences in the expression of immune cells, immune function and immune checkpoint molecules between high-risk group and low-risk group. P4HB may promote bladder cancer progression. CONCLUSION: Based on the differential expression of apoptosis-related genes, we established a risk model to predict the prognosis of bladder cancer patients, in which P4HB promotes BLCA progression. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12894-023-01331-5.
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spelling pubmed-105779082023-10-17 Establishment of prognostic model of bladder cancer based on apoptosis-related genes, in which P4HB promotes BLCA progression Zou, Zhenhai Li, Zhong Sun, Wei Gao, Wuyue Liu, Beibei Liu, Jianmin Guo, Yuanyuan BMC Urol Research BACKGROUND: A variety of apoptosis genes have been confirmed to be related to the occurrence and development of bladder cancer patients, but few studies have paid attention to their significance in the prognosis of bladder cancer. Therefore, this study explored the value of apoptosis-related genes in the prognosis of BLCA by using the data in TCGA database. METHODS: We downloaded the mRNA expression profiles and corresponding clinical data of bladder cancer patients from TCGA database, and obtained 2411 apoptosis-related genes from Deathbase database. Screening out differentially expressed apoptosis-related genes. Cox regression was used to determine the prognostic value of apoptosis-related genes, and then a prognostic risk model was developed. A nomogram based on risk model was constructed to predict the prognosis of bladder cancer patients. At the same time, immune infiltration correlation analysis of genes in the prognosis model. RESULTS: A prognostic model composed of 12 apoptosis-related genes was constructed. According to the risk score calculated by the model, patients were divided into high-risk group and low-risk group. There are significant differences in the expression of immune cells, immune function and immune checkpoint molecules between high-risk group and low-risk group. P4HB may promote bladder cancer progression. CONCLUSION: Based on the differential expression of apoptosis-related genes, we established a risk model to predict the prognosis of bladder cancer patients, in which P4HB promotes BLCA progression. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12894-023-01331-5. BioMed Central 2023-10-16 /pmc/articles/PMC10577908/ /pubmed/37845668 http://dx.doi.org/10.1186/s12894-023-01331-5 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Zou, Zhenhai
Li, Zhong
Sun, Wei
Gao, Wuyue
Liu, Beibei
Liu, Jianmin
Guo, Yuanyuan
Establishment of prognostic model of bladder cancer based on apoptosis-related genes, in which P4HB promotes BLCA progression
title Establishment of prognostic model of bladder cancer based on apoptosis-related genes, in which P4HB promotes BLCA progression
title_full Establishment of prognostic model of bladder cancer based on apoptosis-related genes, in which P4HB promotes BLCA progression
title_fullStr Establishment of prognostic model of bladder cancer based on apoptosis-related genes, in which P4HB promotes BLCA progression
title_full_unstemmed Establishment of prognostic model of bladder cancer based on apoptosis-related genes, in which P4HB promotes BLCA progression
title_short Establishment of prognostic model of bladder cancer based on apoptosis-related genes, in which P4HB promotes BLCA progression
title_sort establishment of prognostic model of bladder cancer based on apoptosis-related genes, in which p4hb promotes blca progression
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10577908/
https://www.ncbi.nlm.nih.gov/pubmed/37845668
http://dx.doi.org/10.1186/s12894-023-01331-5
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