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Domain architecture and protein–protein interactions regulate KDM5A recruitment to the chromatin
Tri-methylation of Histone 3 lysine 4 (H3K4) is an important epigenetic modification whose deposition and removal can affect the chromatin at structural and functional levels. KDM5A is one of the four known H3K4-specific demethylases. It is a part of the KDM5 family, which is characterized by a cata...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10578193/ https://www.ncbi.nlm.nih.gov/pubmed/37838974 http://dx.doi.org/10.1080/15592294.2023.2268813 |
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author | Kataria, Avishek Tyagi, Shweta |
author_facet | Kataria, Avishek Tyagi, Shweta |
author_sort | Kataria, Avishek |
collection | PubMed |
description | Tri-methylation of Histone 3 lysine 4 (H3K4) is an important epigenetic modification whose deposition and removal can affect the chromatin at structural and functional levels. KDM5A is one of the four known H3K4-specific demethylases. It is a part of the KDM5 family, which is characterized by a catalytic Jumonji domain capable of removing H3K4 di- and tri-methylation marks. KDM5A has been found to be involved in multiple cellular processes such as differentiation, metabolism, cell cycle, and transcription. Its link to various diseases, including cancer, makes KDM5A an important target for drug development. However, despite several studies outlining its significance in various pathways, our lack of understanding of its recruitment and function at the target sites on the chromatin presents a challenge in creating effective and targeted treatments. Therefore, it is essential to understand the recruitment mechanism of KDM5A to chromatin, and its activity therein, to comprehend how various roles of KDM5A are regulated. In this review, we discuss how KDM5A functions in a context-dependent manner on the chromatin, either directly through its structural domain, or through various interacting partners, to bring about a diverse range of functions. |
format | Online Article Text |
id | pubmed-10578193 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-105781932023-10-17 Domain architecture and protein–protein interactions regulate KDM5A recruitment to the chromatin Kataria, Avishek Tyagi, Shweta Epigenetics Review Tri-methylation of Histone 3 lysine 4 (H3K4) is an important epigenetic modification whose deposition and removal can affect the chromatin at structural and functional levels. KDM5A is one of the four known H3K4-specific demethylases. It is a part of the KDM5 family, which is characterized by a catalytic Jumonji domain capable of removing H3K4 di- and tri-methylation marks. KDM5A has been found to be involved in multiple cellular processes such as differentiation, metabolism, cell cycle, and transcription. Its link to various diseases, including cancer, makes KDM5A an important target for drug development. However, despite several studies outlining its significance in various pathways, our lack of understanding of its recruitment and function at the target sites on the chromatin presents a challenge in creating effective and targeted treatments. Therefore, it is essential to understand the recruitment mechanism of KDM5A to chromatin, and its activity therein, to comprehend how various roles of KDM5A are regulated. In this review, we discuss how KDM5A functions in a context-dependent manner on the chromatin, either directly through its structural domain, or through various interacting partners, to bring about a diverse range of functions. Taylor & Francis 2023-10-15 /pmc/articles/PMC10578193/ /pubmed/37838974 http://dx.doi.org/10.1080/15592294.2023.2268813 Text en © 2023 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. The terms on which this article has been published allow the posting of the Accepted Manuscript in a repository by the author(s) or with their consent. |
spellingShingle | Review Kataria, Avishek Tyagi, Shweta Domain architecture and protein–protein interactions regulate KDM5A recruitment to the chromatin |
title | Domain architecture and protein–protein interactions regulate KDM5A recruitment to the chromatin |
title_full | Domain architecture and protein–protein interactions regulate KDM5A recruitment to the chromatin |
title_fullStr | Domain architecture and protein–protein interactions regulate KDM5A recruitment to the chromatin |
title_full_unstemmed | Domain architecture and protein–protein interactions regulate KDM5A recruitment to the chromatin |
title_short | Domain architecture and protein–protein interactions regulate KDM5A recruitment to the chromatin |
title_sort | domain architecture and protein–protein interactions regulate kdm5a recruitment to the chromatin |
topic | Review |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10578193/ https://www.ncbi.nlm.nih.gov/pubmed/37838974 http://dx.doi.org/10.1080/15592294.2023.2268813 |
work_keys_str_mv | AT katariaavishek domainarchitectureandproteinproteininteractionsregulatekdm5arecruitmenttothechromatin AT tyagishweta domainarchitectureandproteinproteininteractionsregulatekdm5arecruitmenttothechromatin |