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Domain architecture and protein–protein interactions regulate KDM5A recruitment to the chromatin

Tri-methylation of Histone 3 lysine 4 (H3K4) is an important epigenetic modification whose deposition and removal can affect the chromatin at structural and functional levels. KDM5A is one of the four known H3K4-specific demethylases. It is a part of the KDM5 family, which is characterized by a cata...

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Autores principales: Kataria, Avishek, Tyagi, Shweta
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10578193/
https://www.ncbi.nlm.nih.gov/pubmed/37838974
http://dx.doi.org/10.1080/15592294.2023.2268813
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author Kataria, Avishek
Tyagi, Shweta
author_facet Kataria, Avishek
Tyagi, Shweta
author_sort Kataria, Avishek
collection PubMed
description Tri-methylation of Histone 3 lysine 4 (H3K4) is an important epigenetic modification whose deposition and removal can affect the chromatin at structural and functional levels. KDM5A is one of the four known H3K4-specific demethylases. It is a part of the KDM5 family, which is characterized by a catalytic Jumonji domain capable of removing H3K4 di- and tri-methylation marks. KDM5A has been found to be involved in multiple cellular processes such as differentiation, metabolism, cell cycle, and transcription. Its link to various diseases, including cancer, makes KDM5A an important target for drug development. However, despite several studies outlining its significance in various pathways, our lack of understanding of its recruitment and function at the target sites on the chromatin presents a challenge in creating effective and targeted treatments. Therefore, it is essential to understand the recruitment mechanism of KDM5A to chromatin, and its activity therein, to comprehend how various roles of KDM5A are regulated. In this review, we discuss how KDM5A functions in a context-dependent manner on the chromatin, either directly through its structural domain, or through various interacting partners, to bring about a diverse range of functions.
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spelling pubmed-105781932023-10-17 Domain architecture and protein–protein interactions regulate KDM5A recruitment to the chromatin Kataria, Avishek Tyagi, Shweta Epigenetics Review Tri-methylation of Histone 3 lysine 4 (H3K4) is an important epigenetic modification whose deposition and removal can affect the chromatin at structural and functional levels. KDM5A is one of the four known H3K4-specific demethylases. It is a part of the KDM5 family, which is characterized by a catalytic Jumonji domain capable of removing H3K4 di- and tri-methylation marks. KDM5A has been found to be involved in multiple cellular processes such as differentiation, metabolism, cell cycle, and transcription. Its link to various diseases, including cancer, makes KDM5A an important target for drug development. However, despite several studies outlining its significance in various pathways, our lack of understanding of its recruitment and function at the target sites on the chromatin presents a challenge in creating effective and targeted treatments. Therefore, it is essential to understand the recruitment mechanism of KDM5A to chromatin, and its activity therein, to comprehend how various roles of KDM5A are regulated. In this review, we discuss how KDM5A functions in a context-dependent manner on the chromatin, either directly through its structural domain, or through various interacting partners, to bring about a diverse range of functions. Taylor & Francis 2023-10-15 /pmc/articles/PMC10578193/ /pubmed/37838974 http://dx.doi.org/10.1080/15592294.2023.2268813 Text en © 2023 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. The terms on which this article has been published allow the posting of the Accepted Manuscript in a repository by the author(s) or with their consent.
spellingShingle Review
Kataria, Avishek
Tyagi, Shweta
Domain architecture and protein–protein interactions regulate KDM5A recruitment to the chromatin
title Domain architecture and protein–protein interactions regulate KDM5A recruitment to the chromatin
title_full Domain architecture and protein–protein interactions regulate KDM5A recruitment to the chromatin
title_fullStr Domain architecture and protein–protein interactions regulate KDM5A recruitment to the chromatin
title_full_unstemmed Domain architecture and protein–protein interactions regulate KDM5A recruitment to the chromatin
title_short Domain architecture and protein–protein interactions regulate KDM5A recruitment to the chromatin
title_sort domain architecture and protein–protein interactions regulate kdm5a recruitment to the chromatin
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10578193/
https://www.ncbi.nlm.nih.gov/pubmed/37838974
http://dx.doi.org/10.1080/15592294.2023.2268813
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