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Redundancy and the role of protein copy numbers in the cell polarization machinery of budding yeast
How can a self-organized cellular function evolve, adapt to perturbations, and acquire new sub-functions? To make progress in answering these basic questions of evolutionary cell biology, we analyze, as a concrete example, the cell polarity machinery of Saccharomyces cerevisiae. This cellular module...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10579396/ https://www.ncbi.nlm.nih.gov/pubmed/37845215 http://dx.doi.org/10.1038/s41467-023-42100-0 |
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author | Brauns, Fridtjof Iñigo de la Cruz, Leila Daalman, Werner K.-G. de Bruin, Ilse Halatek, Jacob Laan, Liedewij Frey, Erwin |
author_facet | Brauns, Fridtjof Iñigo de la Cruz, Leila Daalman, Werner K.-G. de Bruin, Ilse Halatek, Jacob Laan, Liedewij Frey, Erwin |
author_sort | Brauns, Fridtjof |
collection | PubMed |
description | How can a self-organized cellular function evolve, adapt to perturbations, and acquire new sub-functions? To make progress in answering these basic questions of evolutionary cell biology, we analyze, as a concrete example, the cell polarity machinery of Saccharomyces cerevisiae. This cellular module exhibits an intriguing resilience: it remains operational under genetic perturbations and recovers quickly and reproducibly from the deletion of one of its key components. Using a combination of modeling, conceptual theory, and experiments, we propose that multiple, redundant self-organization mechanisms coexist within the protein network underlying cell polarization and are responsible for the module’s resilience and adaptability. Based on our mechanistic understanding of polarity establishment, we hypothesize that scaffold proteins, by introducing new connections in the existing network, can increase the redundancy of mechanisms and thus increase the evolvability of other network components. Moreover, our work gives a perspective on how a complex, redundant cellular module might have evolved from a more rudimental ancestral form. |
format | Online Article Text |
id | pubmed-10579396 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-105793962023-10-18 Redundancy and the role of protein copy numbers in the cell polarization machinery of budding yeast Brauns, Fridtjof Iñigo de la Cruz, Leila Daalman, Werner K.-G. de Bruin, Ilse Halatek, Jacob Laan, Liedewij Frey, Erwin Nat Commun Article How can a self-organized cellular function evolve, adapt to perturbations, and acquire new sub-functions? To make progress in answering these basic questions of evolutionary cell biology, we analyze, as a concrete example, the cell polarity machinery of Saccharomyces cerevisiae. This cellular module exhibits an intriguing resilience: it remains operational under genetic perturbations and recovers quickly and reproducibly from the deletion of one of its key components. Using a combination of modeling, conceptual theory, and experiments, we propose that multiple, redundant self-organization mechanisms coexist within the protein network underlying cell polarization and are responsible for the module’s resilience and adaptability. Based on our mechanistic understanding of polarity establishment, we hypothesize that scaffold proteins, by introducing new connections in the existing network, can increase the redundancy of mechanisms and thus increase the evolvability of other network components. Moreover, our work gives a perspective on how a complex, redundant cellular module might have evolved from a more rudimental ancestral form. Nature Publishing Group UK 2023-10-16 /pmc/articles/PMC10579396/ /pubmed/37845215 http://dx.doi.org/10.1038/s41467-023-42100-0 Text en © The Author(s) 2023, corrected publication 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Brauns, Fridtjof Iñigo de la Cruz, Leila Daalman, Werner K.-G. de Bruin, Ilse Halatek, Jacob Laan, Liedewij Frey, Erwin Redundancy and the role of protein copy numbers in the cell polarization machinery of budding yeast |
title | Redundancy and the role of protein copy numbers in the cell polarization machinery of budding yeast |
title_full | Redundancy and the role of protein copy numbers in the cell polarization machinery of budding yeast |
title_fullStr | Redundancy and the role of protein copy numbers in the cell polarization machinery of budding yeast |
title_full_unstemmed | Redundancy and the role of protein copy numbers in the cell polarization machinery of budding yeast |
title_short | Redundancy and the role of protein copy numbers in the cell polarization machinery of budding yeast |
title_sort | redundancy and the role of protein copy numbers in the cell polarization machinery of budding yeast |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10579396/ https://www.ncbi.nlm.nih.gov/pubmed/37845215 http://dx.doi.org/10.1038/s41467-023-42100-0 |
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