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Combining proteomic markers to construct a logistic regression model for polycystic ovary syndrome
INTRODUCTION: Proteomics technology has been used in various fields in recent years for the Q6 exploration of novel markers and the study of disease pathogenesis, and has become one of the most important tools for researchers to explore unknown areas. However, there are fewer studies related to the...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10579946/ https://www.ncbi.nlm.nih.gov/pubmed/37854181 http://dx.doi.org/10.3389/fendo.2023.1227252 |
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author | Tong, Cheng Wu, Yue Zhuang, Zhenchao Wang, Zhejiong Yu, Ying |
author_facet | Tong, Cheng Wu, Yue Zhuang, Zhenchao Wang, Zhejiong Yu, Ying |
author_sort | Tong, Cheng |
collection | PubMed |
description | INTRODUCTION: Proteomics technology has been used in various fields in recent years for the Q6 exploration of novel markers and the study of disease pathogenesis, and has become one of the most important tools for researchers to explore unknown areas. However, there are fewer studies related to the construction of clinical models using proteomics markers. METHODS: In our previous study we used DIA proteomics to screen for proteins that were significant in 31 PCOS patients compared to women of normal reproductive age. In this study, we used logistic regression among these protein markers to screen out variables with diagnostic value and constructed logistic regression models. RESULTS: We constructed a logistic model using these protein markers, where HIST1H4A (OR=1.037) was an independent risk factor for polycystic ovary syndrome and TREML1 (OR=0.976) were protective factors for the disease. The logistic regression model equation is: Logit (PCOS) =0.036*[HIST1H4A]-0.024*[TREML1]-16.368. The ROC curve analyzing the diagnostic value of the model has an AUC value of 0.977 and a Youden index of0.903, which gives a cutoff value of 0.518 at this point. The model has a sensitivity of 93.5% and a specificity of 96.8%. Calibration curves show fair consistency of the model. DISCUSSION: Our study is the first to use proteomic results with clinical biochemical data to construct a logistic regression model, and the model is consistent. However, our study still needs a more complete sample to confirm our findings. |
format | Online Article Text |
id | pubmed-10579946 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-105799462023-10-18 Combining proteomic markers to construct a logistic regression model for polycystic ovary syndrome Tong, Cheng Wu, Yue Zhuang, Zhenchao Wang, Zhejiong Yu, Ying Front Endocrinol (Lausanne) Endocrinology INTRODUCTION: Proteomics technology has been used in various fields in recent years for the Q6 exploration of novel markers and the study of disease pathogenesis, and has become one of the most important tools for researchers to explore unknown areas. However, there are fewer studies related to the construction of clinical models using proteomics markers. METHODS: In our previous study we used DIA proteomics to screen for proteins that were significant in 31 PCOS patients compared to women of normal reproductive age. In this study, we used logistic regression among these protein markers to screen out variables with diagnostic value and constructed logistic regression models. RESULTS: We constructed a logistic model using these protein markers, where HIST1H4A (OR=1.037) was an independent risk factor for polycystic ovary syndrome and TREML1 (OR=0.976) were protective factors for the disease. The logistic regression model equation is: Logit (PCOS) =0.036*[HIST1H4A]-0.024*[TREML1]-16.368. The ROC curve analyzing the diagnostic value of the model has an AUC value of 0.977 and a Youden index of0.903, which gives a cutoff value of 0.518 at this point. The model has a sensitivity of 93.5% and a specificity of 96.8%. Calibration curves show fair consistency of the model. DISCUSSION: Our study is the first to use proteomic results with clinical biochemical data to construct a logistic regression model, and the model is consistent. However, our study still needs a more complete sample to confirm our findings. Frontiers Media S.A. 2023-10-03 /pmc/articles/PMC10579946/ /pubmed/37854181 http://dx.doi.org/10.3389/fendo.2023.1227252 Text en Copyright © 2023 Tong, Wu, Zhuang, Wang and Yu https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Endocrinology Tong, Cheng Wu, Yue Zhuang, Zhenchao Wang, Zhejiong Yu, Ying Combining proteomic markers to construct a logistic regression model for polycystic ovary syndrome |
title | Combining proteomic markers to construct a logistic regression model for polycystic ovary syndrome |
title_full | Combining proteomic markers to construct a logistic regression model for polycystic ovary syndrome |
title_fullStr | Combining proteomic markers to construct a logistic regression model for polycystic ovary syndrome |
title_full_unstemmed | Combining proteomic markers to construct a logistic regression model for polycystic ovary syndrome |
title_short | Combining proteomic markers to construct a logistic regression model for polycystic ovary syndrome |
title_sort | combining proteomic markers to construct a logistic regression model for polycystic ovary syndrome |
topic | Endocrinology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10579946/ https://www.ncbi.nlm.nih.gov/pubmed/37854181 http://dx.doi.org/10.3389/fendo.2023.1227252 |
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