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Unlocking potential inhibitors for Bruton's tyrosine kinase through in-silico drug repurposing strategies

Bruton's tyrosine kinase (BTK) is a non-receptor protein kinase that plays a crucial role in various biological processes, including immune system function and cancer development. Therefore, inhibition of BTK has been proposed as a therapeutic strategy for various complex diseases. In this stud...

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Autores principales: Alrouji, Mohammed, Benjamin, Lizy Sonia, Alhumaydhi, Fahad A., Al Abdulmonem, Waleed, Baeesa, Saleh Salem, Rehan, Mohd, Shahwan, Moyad, Shamsi, Anas, Akhtar, Atiya
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10582150/
https://www.ncbi.nlm.nih.gov/pubmed/37848584
http://dx.doi.org/10.1038/s41598-023-44956-0
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author Alrouji, Mohammed
Benjamin, Lizy Sonia
Alhumaydhi, Fahad A.
Al Abdulmonem, Waleed
Baeesa, Saleh Salem
Rehan, Mohd
Shahwan, Moyad
Shamsi, Anas
Akhtar, Atiya
author_facet Alrouji, Mohammed
Benjamin, Lizy Sonia
Alhumaydhi, Fahad A.
Al Abdulmonem, Waleed
Baeesa, Saleh Salem
Rehan, Mohd
Shahwan, Moyad
Shamsi, Anas
Akhtar, Atiya
author_sort Alrouji, Mohammed
collection PubMed
description Bruton's tyrosine kinase (BTK) is a non-receptor protein kinase that plays a crucial role in various biological processes, including immune system function and cancer development. Therefore, inhibition of BTK has been proposed as a therapeutic strategy for various complex diseases. In this study, we aimed to identify potential inhibitors of BTK by using a drug repurposing approach. To identify potential inhibitors, we performed a molecular docking-based virtual screening using a library of repurposed drugs from DrugBank. We then used various filtrations followed by molecular dynamics (MD) simulations, principal component analysis (PCA), and Molecular Mechanics Poisson Boltzmann Surface Area (MM-PBSA) analysis to further evaluate the binding interactions and stability of the top-ranking compounds. Molecular docking-based virtual screening approach identified several repurposed drugs as potential BTK inhibitors, including Eltrombopag and Alectinib, which have already been approved for human use. All-atom MD simulations provided insights into the binding interactions and stability of the identified compounds, which will be helpful for further experimental validation and optimization. Overall, our study demonstrates that drug repurposing is a promising approach to identify potential inhibitors of BTK and highlights the importance of computational methods in drug discovery.
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spelling pubmed-105821502023-10-19 Unlocking potential inhibitors for Bruton's tyrosine kinase through in-silico drug repurposing strategies Alrouji, Mohammed Benjamin, Lizy Sonia Alhumaydhi, Fahad A. Al Abdulmonem, Waleed Baeesa, Saleh Salem Rehan, Mohd Shahwan, Moyad Shamsi, Anas Akhtar, Atiya Sci Rep Article Bruton's tyrosine kinase (BTK) is a non-receptor protein kinase that plays a crucial role in various biological processes, including immune system function and cancer development. Therefore, inhibition of BTK has been proposed as a therapeutic strategy for various complex diseases. In this study, we aimed to identify potential inhibitors of BTK by using a drug repurposing approach. To identify potential inhibitors, we performed a molecular docking-based virtual screening using a library of repurposed drugs from DrugBank. We then used various filtrations followed by molecular dynamics (MD) simulations, principal component analysis (PCA), and Molecular Mechanics Poisson Boltzmann Surface Area (MM-PBSA) analysis to further evaluate the binding interactions and stability of the top-ranking compounds. Molecular docking-based virtual screening approach identified several repurposed drugs as potential BTK inhibitors, including Eltrombopag and Alectinib, which have already been approved for human use. All-atom MD simulations provided insights into the binding interactions and stability of the identified compounds, which will be helpful for further experimental validation and optimization. Overall, our study demonstrates that drug repurposing is a promising approach to identify potential inhibitors of BTK and highlights the importance of computational methods in drug discovery. Nature Publishing Group UK 2023-10-17 /pmc/articles/PMC10582150/ /pubmed/37848584 http://dx.doi.org/10.1038/s41598-023-44956-0 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Alrouji, Mohammed
Benjamin, Lizy Sonia
Alhumaydhi, Fahad A.
Al Abdulmonem, Waleed
Baeesa, Saleh Salem
Rehan, Mohd
Shahwan, Moyad
Shamsi, Anas
Akhtar, Atiya
Unlocking potential inhibitors for Bruton's tyrosine kinase through in-silico drug repurposing strategies
title Unlocking potential inhibitors for Bruton's tyrosine kinase through in-silico drug repurposing strategies
title_full Unlocking potential inhibitors for Bruton's tyrosine kinase through in-silico drug repurposing strategies
title_fullStr Unlocking potential inhibitors for Bruton's tyrosine kinase through in-silico drug repurposing strategies
title_full_unstemmed Unlocking potential inhibitors for Bruton's tyrosine kinase through in-silico drug repurposing strategies
title_short Unlocking potential inhibitors for Bruton's tyrosine kinase through in-silico drug repurposing strategies
title_sort unlocking potential inhibitors for bruton's tyrosine kinase through in-silico drug repurposing strategies
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10582150/
https://www.ncbi.nlm.nih.gov/pubmed/37848584
http://dx.doi.org/10.1038/s41598-023-44956-0
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