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Wing Interferential Patterns (WIPs) and machine learning for the classification of some Aedes species of medical interest

Hematophagous insects belonging to the Aedes genus are proven vectors of viral and filarial pathogens of medical interest. Aedes albopictus is an increasingly important vector because of its rapid worldwide expansion. In the context of global climate change and the emergence of zoonotic infectious d...

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Autores principales: Cannet, Arnaud, Simon-Chane, Camille, Histace, Aymeric, Akhoundi, Mohammad, Romain, Olivier, Souchaud, Marc, Jacob, Pierre, Sereno, Darian, Gouagna, Louis-Clément, Bousses, Philippe, Mathieu-Daude, Françoise, Sereno, Denis
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10582169/
https://www.ncbi.nlm.nih.gov/pubmed/37848666
http://dx.doi.org/10.1038/s41598-023-44945-3
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author Cannet, Arnaud
Simon-Chane, Camille
Histace, Aymeric
Akhoundi, Mohammad
Romain, Olivier
Souchaud, Marc
Jacob, Pierre
Sereno, Darian
Gouagna, Louis-Clément
Bousses, Philippe
Mathieu-Daude, Françoise
Sereno, Denis
author_facet Cannet, Arnaud
Simon-Chane, Camille
Histace, Aymeric
Akhoundi, Mohammad
Romain, Olivier
Souchaud, Marc
Jacob, Pierre
Sereno, Darian
Gouagna, Louis-Clément
Bousses, Philippe
Mathieu-Daude, Françoise
Sereno, Denis
author_sort Cannet, Arnaud
collection PubMed
description Hematophagous insects belonging to the Aedes genus are proven vectors of viral and filarial pathogens of medical interest. Aedes albopictus is an increasingly important vector because of its rapid worldwide expansion. In the context of global climate change and the emergence of zoonotic infectious diseases, identification tools with field application are required to strengthen efforts in the entomological survey of arthropods with medical interest. Large scales and proactive entomological surveys of Aedes mosquitoes need skilled technicians and/or costly technical equipment, further puzzled by the vast amount of named species. In this study, we developed an automatic classification system of Aedes species by taking advantage of the species-specific marker displayed by Wing Interferential Patterns. A database holding 494 photomicrographs of 24 Aedes spp. from which those documented with more than ten pictures have undergone a deep learning methodology to train a convolutional neural network and test its accuracy to classify samples at the genus, subgenus, and species taxonomic levels. We recorded an accuracy of 95% at the genus level and > 85% for two (Ochlerotatus and Stegomyia) out of three subgenera tested. Lastly, eight were accurately classified among the 10 Aedes sp. that have undergone a training process with an overall accuracy of > 70%. Altogether, these results demonstrate the potential of this methodology for Aedes species identification and will represent a tool for the future implementation of large-scale entomological surveys.
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spelling pubmed-105821692023-10-19 Wing Interferential Patterns (WIPs) and machine learning for the classification of some Aedes species of medical interest Cannet, Arnaud Simon-Chane, Camille Histace, Aymeric Akhoundi, Mohammad Romain, Olivier Souchaud, Marc Jacob, Pierre Sereno, Darian Gouagna, Louis-Clément Bousses, Philippe Mathieu-Daude, Françoise Sereno, Denis Sci Rep Article Hematophagous insects belonging to the Aedes genus are proven vectors of viral and filarial pathogens of medical interest. Aedes albopictus is an increasingly important vector because of its rapid worldwide expansion. In the context of global climate change and the emergence of zoonotic infectious diseases, identification tools with field application are required to strengthen efforts in the entomological survey of arthropods with medical interest. Large scales and proactive entomological surveys of Aedes mosquitoes need skilled technicians and/or costly technical equipment, further puzzled by the vast amount of named species. In this study, we developed an automatic classification system of Aedes species by taking advantage of the species-specific marker displayed by Wing Interferential Patterns. A database holding 494 photomicrographs of 24 Aedes spp. from which those documented with more than ten pictures have undergone a deep learning methodology to train a convolutional neural network and test its accuracy to classify samples at the genus, subgenus, and species taxonomic levels. We recorded an accuracy of 95% at the genus level and > 85% for two (Ochlerotatus and Stegomyia) out of three subgenera tested. Lastly, eight were accurately classified among the 10 Aedes sp. that have undergone a training process with an overall accuracy of > 70%. Altogether, these results demonstrate the potential of this methodology for Aedes species identification and will represent a tool for the future implementation of large-scale entomological surveys. Nature Publishing Group UK 2023-10-17 /pmc/articles/PMC10582169/ /pubmed/37848666 http://dx.doi.org/10.1038/s41598-023-44945-3 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Cannet, Arnaud
Simon-Chane, Camille
Histace, Aymeric
Akhoundi, Mohammad
Romain, Olivier
Souchaud, Marc
Jacob, Pierre
Sereno, Darian
Gouagna, Louis-Clément
Bousses, Philippe
Mathieu-Daude, Françoise
Sereno, Denis
Wing Interferential Patterns (WIPs) and machine learning for the classification of some Aedes species of medical interest
title Wing Interferential Patterns (WIPs) and machine learning for the classification of some Aedes species of medical interest
title_full Wing Interferential Patterns (WIPs) and machine learning for the classification of some Aedes species of medical interest
title_fullStr Wing Interferential Patterns (WIPs) and machine learning for the classification of some Aedes species of medical interest
title_full_unstemmed Wing Interferential Patterns (WIPs) and machine learning for the classification of some Aedes species of medical interest
title_short Wing Interferential Patterns (WIPs) and machine learning for the classification of some Aedes species of medical interest
title_sort wing interferential patterns (wips) and machine learning for the classification of some aedes species of medical interest
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10582169/
https://www.ncbi.nlm.nih.gov/pubmed/37848666
http://dx.doi.org/10.1038/s41598-023-44945-3
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