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Time-domain proton-detected local-field NMR for molecular structure determination in complex lipid membranes

Proton-detected local-field (PDLF) NMR spectroscopy, using magic-angle spinning and dipolar recoupling, is presently the most powerful experimental technique for obtaining atomistic structural information from small molecules undergoing anisotropic motion. Common examples include peptides, drugs, or...

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Autores principales: Wurl, Anika, Saalwächter, Kay, Mendes Ferreira, Tiago
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Copernicus GmbH 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10583295/
https://www.ncbi.nlm.nih.gov/pubmed/37904803
http://dx.doi.org/10.5194/mr-4-115-2023
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author Wurl, Anika
Saalwächter, Kay
Mendes Ferreira, Tiago
author_facet Wurl, Anika
Saalwächter, Kay
Mendes Ferreira, Tiago
author_sort Wurl, Anika
collection PubMed
description Proton-detected local-field (PDLF) NMR spectroscopy, using magic-angle spinning and dipolar recoupling, is presently the most powerful experimental technique for obtaining atomistic structural information from small molecules undergoing anisotropic motion. Common examples include peptides, drugs, or lipids in model membranes and molecules that form liquid crystals. The measurements on complex systems are however compromised by the larger number of transients required. Retaining sufficient spectral quality in the direct dimension requires that the indirect time-domain modulation becomes too short for yielding dipolar splittings in the frequency domain. In such cases, the dipolar couplings can be obtained by fitting the experimental data; however ideal models often fail to fit PDLF data properly due to effects of radiofrequency field (RF) spatial inhomogeneity. Here, we demonstrate that by accounting for RF spatial inhomogeneity in the modeling of R-symmetry-based PDLF NMR experiments, the fitting accuracy is improved, facilitating the analysis of the experimental data. In comparison to the analysis of dipolar splittings without any fitting procedure, the accurate modeling of PDLF measurements makes possible three important improvements: the use of shorter experiments that enable the investigation of samples with a higher level of complexity, the measurement of C–H bond order parameters with smaller magnitudes [Formula: see text] and of smaller variations of [Formula: see text] caused by perturbations of the system, and the determination of [Formula: see text] values with small differences from distinct sites having the same chemical shift. The increase in fitting accuracy is demonstrated by comparison with [Formula: see text] H NMR quadrupolar echo experiments on mixtures of deuterated and non-deuterated dimyristoylphosphatidylcholine (DMPC) and with 1-palmitoyl-2-oleoyl- [Formula: see text] -glycero-3-phosphoethanolamine (POPE) membranes. Accurate modeling of PDLF NMR experiments is highly useful for investigating complex membrane systems. This is exemplified by application of the proposed fitting procedure for the characterization of membranes composed of a brain lipid extract with many distinct lipid types.
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spelling pubmed-105832952023-10-30 Time-domain proton-detected local-field NMR for molecular structure determination in complex lipid membranes Wurl, Anika Saalwächter, Kay Mendes Ferreira, Tiago Magn Reson (Gott) Research Article Proton-detected local-field (PDLF) NMR spectroscopy, using magic-angle spinning and dipolar recoupling, is presently the most powerful experimental technique for obtaining atomistic structural information from small molecules undergoing anisotropic motion. Common examples include peptides, drugs, or lipids in model membranes and molecules that form liquid crystals. The measurements on complex systems are however compromised by the larger number of transients required. Retaining sufficient spectral quality in the direct dimension requires that the indirect time-domain modulation becomes too short for yielding dipolar splittings in the frequency domain. In such cases, the dipolar couplings can be obtained by fitting the experimental data; however ideal models often fail to fit PDLF data properly due to effects of radiofrequency field (RF) spatial inhomogeneity. Here, we demonstrate that by accounting for RF spatial inhomogeneity in the modeling of R-symmetry-based PDLF NMR experiments, the fitting accuracy is improved, facilitating the analysis of the experimental data. In comparison to the analysis of dipolar splittings without any fitting procedure, the accurate modeling of PDLF measurements makes possible three important improvements: the use of shorter experiments that enable the investigation of samples with a higher level of complexity, the measurement of C–H bond order parameters with smaller magnitudes [Formula: see text] and of smaller variations of [Formula: see text] caused by perturbations of the system, and the determination of [Formula: see text] values with small differences from distinct sites having the same chemical shift. The increase in fitting accuracy is demonstrated by comparison with [Formula: see text] H NMR quadrupolar echo experiments on mixtures of deuterated and non-deuterated dimyristoylphosphatidylcholine (DMPC) and with 1-palmitoyl-2-oleoyl- [Formula: see text] -glycero-3-phosphoethanolamine (POPE) membranes. Accurate modeling of PDLF NMR experiments is highly useful for investigating complex membrane systems. This is exemplified by application of the proposed fitting procedure for the characterization of membranes composed of a brain lipid extract with many distinct lipid types. Copernicus GmbH 2023-05-12 /pmc/articles/PMC10583295/ /pubmed/37904803 http://dx.doi.org/10.5194/mr-4-115-2023 Text en Copyright: © 2023 Anika Wurl et al. https://creativecommons.org/licenses/by/4.0/This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this licence, visit https://creativecommons.org/licenses/by/4.0/
spellingShingle Research Article
Wurl, Anika
Saalwächter, Kay
Mendes Ferreira, Tiago
Time-domain proton-detected local-field NMR for molecular structure determination in complex lipid membranes
title Time-domain proton-detected local-field NMR for molecular structure determination in complex lipid membranes
title_full Time-domain proton-detected local-field NMR for molecular structure determination in complex lipid membranes
title_fullStr Time-domain proton-detected local-field NMR for molecular structure determination in complex lipid membranes
title_full_unstemmed Time-domain proton-detected local-field NMR for molecular structure determination in complex lipid membranes
title_short Time-domain proton-detected local-field NMR for molecular structure determination in complex lipid membranes
title_sort time-domain proton-detected local-field nmr for molecular structure determination in complex lipid membranes
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10583295/
https://www.ncbi.nlm.nih.gov/pubmed/37904803
http://dx.doi.org/10.5194/mr-4-115-2023
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