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Aromatic interactions with heterocycles in water

Conformationally well-defined supramolecular complexes that can be studied in different solvents provide a platform for separating and quantifying free energy contributions due to functional group interactions and desolvation. Here 1:1 complexes formed between four different calix[4]pyrrole receptor...

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Autores principales: Tobajas-Curiel, Gloria, Sun, Qingqing, Sanders, Jeremy K. M., Ballester, Pablo, Hunter, Christopher A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society of Chemistry 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10583712/
https://www.ncbi.nlm.nih.gov/pubmed/37860651
http://dx.doi.org/10.1039/d3sc03824f
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author Tobajas-Curiel, Gloria
Sun, Qingqing
Sanders, Jeremy K. M.
Ballester, Pablo
Hunter, Christopher A.
author_facet Tobajas-Curiel, Gloria
Sun, Qingqing
Sanders, Jeremy K. M.
Ballester, Pablo
Hunter, Christopher A.
author_sort Tobajas-Curiel, Gloria
collection PubMed
description Conformationally well-defined supramolecular complexes that can be studied in different solvents provide a platform for separating and quantifying free energy contributions due to functional group interactions and desolvation. Here 1:1 complexes formed between four different calix[4]pyrrole receptors and eleven different pyridine N-oxide guests have been used to dissect the factors that govern aromatic interactions with heterocycles in water and in chloroform solution. (1)H NMR spectroscopy shows that the three-dimensional structures of the complexes are fixed by four H-bonding interactions between the pyrrole donors at the bottom of the receptor and the N-oxide acceptor on the guest, locking the geometrical arrangement of interacting functional groups in the binding pocket at the other end of the receptor. An aromatic heterocycle on the guest makes two stacking interactions and two edge-to-face interactions with the side walls of the receptor. Chemical double mutant cycles were used to measure the free energy contribution of these four aromatic interactions to the overall stability of the complex. In chloroform, the aromatic interactions measured with pyridine, pyrimidine, furan, thiophene and thiazole are similar to the interactions with a phenyl group, but the effect of introducing a heteroatom depends on where it sits with respect to the aromatic side-walls of the cavity. A nitrogen lone pair directed into a π-face of the side-walls of the binding site leads to repulsive interactions of up to 8 kJ mol(−1). In water, the heterocycle aromatic interactions are all significantly more favourable (by up to 12 kJ mol(−1)). For the non-polar heterocycles, furan and thiophene, the increase in interaction energy correlates directly with hydrophobicity, as measured by the free energy of transfer of the heterocycle from n-hexadecane into water (ΔG°(water–hex)). For the heterocycles with polar nitrogen H-bond acceptors, water can access cracks in the walls of the receptor binding site to solvate the edges of the heterocycles without significantly affecting the geometry of the aromatic interactions, and these nitrogen–water H-bonds stabilise the complexes by about 15 kJ mol(−1). The results highlight the complexity of the solvation processes that govern molecular recognition in water.
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spelling pubmed-105837122023-10-19 Aromatic interactions with heterocycles in water Tobajas-Curiel, Gloria Sun, Qingqing Sanders, Jeremy K. M. Ballester, Pablo Hunter, Christopher A. Chem Sci Chemistry Conformationally well-defined supramolecular complexes that can be studied in different solvents provide a platform for separating and quantifying free energy contributions due to functional group interactions and desolvation. Here 1:1 complexes formed between four different calix[4]pyrrole receptors and eleven different pyridine N-oxide guests have been used to dissect the factors that govern aromatic interactions with heterocycles in water and in chloroform solution. (1)H NMR spectroscopy shows that the three-dimensional structures of the complexes are fixed by four H-bonding interactions between the pyrrole donors at the bottom of the receptor and the N-oxide acceptor on the guest, locking the geometrical arrangement of interacting functional groups in the binding pocket at the other end of the receptor. An aromatic heterocycle on the guest makes two stacking interactions and two edge-to-face interactions with the side walls of the receptor. Chemical double mutant cycles were used to measure the free energy contribution of these four aromatic interactions to the overall stability of the complex. In chloroform, the aromatic interactions measured with pyridine, pyrimidine, furan, thiophene and thiazole are similar to the interactions with a phenyl group, but the effect of introducing a heteroatom depends on where it sits with respect to the aromatic side-walls of the cavity. A nitrogen lone pair directed into a π-face of the side-walls of the binding site leads to repulsive interactions of up to 8 kJ mol(−1). In water, the heterocycle aromatic interactions are all significantly more favourable (by up to 12 kJ mol(−1)). For the non-polar heterocycles, furan and thiophene, the increase in interaction energy correlates directly with hydrophobicity, as measured by the free energy of transfer of the heterocycle from n-hexadecane into water (ΔG°(water–hex)). For the heterocycles with polar nitrogen H-bond acceptors, water can access cracks in the walls of the receptor binding site to solvate the edges of the heterocycles without significantly affecting the geometry of the aromatic interactions, and these nitrogen–water H-bonds stabilise the complexes by about 15 kJ mol(−1). The results highlight the complexity of the solvation processes that govern molecular recognition in water. The Royal Society of Chemistry 2023-09-29 /pmc/articles/PMC10583712/ /pubmed/37860651 http://dx.doi.org/10.1039/d3sc03824f Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by/3.0/
spellingShingle Chemistry
Tobajas-Curiel, Gloria
Sun, Qingqing
Sanders, Jeremy K. M.
Ballester, Pablo
Hunter, Christopher A.
Aromatic interactions with heterocycles in water
title Aromatic interactions with heterocycles in water
title_full Aromatic interactions with heterocycles in water
title_fullStr Aromatic interactions with heterocycles in water
title_full_unstemmed Aromatic interactions with heterocycles in water
title_short Aromatic interactions with heterocycles in water
title_sort aromatic interactions with heterocycles in water
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10583712/
https://www.ncbi.nlm.nih.gov/pubmed/37860651
http://dx.doi.org/10.1039/d3sc03824f
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