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Anatomy segmentation in laparoscopic surgery: comparison of machine learning and human expertise – an experimental study

BACKGROUND: Lack of anatomy recognition represents a clinically relevant risk in abdominal surgery. Machine learning (ML) methods can help identify visible patterns and risk structures; however, their practical value remains largely unclear. MATERIALS AND METHODS: Based on a novel dataset of 13 195...

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Autores principales: Kolbinger, Fiona R., Rinner, Franziska M., Jenke, Alexander C., Carstens, Matthias, Krell, Stefanie, Leger, Stefan, Distler, Marius, Weitz, Jürgen, Speidel, Stefanie, Bodenstedt, Sebastian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Lippincott Williams & Wilkins 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10583931/
https://www.ncbi.nlm.nih.gov/pubmed/37526099
http://dx.doi.org/10.1097/JS9.0000000000000595
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author Kolbinger, Fiona R.
Rinner, Franziska M.
Jenke, Alexander C.
Carstens, Matthias
Krell, Stefanie
Leger, Stefan
Distler, Marius
Weitz, Jürgen
Speidel, Stefanie
Bodenstedt, Sebastian
author_facet Kolbinger, Fiona R.
Rinner, Franziska M.
Jenke, Alexander C.
Carstens, Matthias
Krell, Stefanie
Leger, Stefan
Distler, Marius
Weitz, Jürgen
Speidel, Stefanie
Bodenstedt, Sebastian
author_sort Kolbinger, Fiona R.
collection PubMed
description BACKGROUND: Lack of anatomy recognition represents a clinically relevant risk in abdominal surgery. Machine learning (ML) methods can help identify visible patterns and risk structures; however, their practical value remains largely unclear. MATERIALS AND METHODS: Based on a novel dataset of 13 195 laparoscopic images with pixel-wise segmentations of 11 anatomical structures, we developed specialized segmentation models for each structure and combined models for all anatomical structures using two state-of-the-art model architectures (DeepLabv3 and SegFormer) and compared segmentation performance of algorithms to a cohort of 28 physicians, medical students, and medical laypersons using the example of pancreas segmentation. RESULTS: Mean Intersection-over-Union for semantic segmentation of intra-abdominal structures ranged from 0.28 to 0.83 and from 0.23 to 0.77 for the DeepLabv3-based structure-specific and combined models, and from 0.31 to 0.85 and from 0.26 to 0.67 for the SegFormer-based structure-specific and combined models, respectively. Both the structure-specific and the combined DeepLabv3-based models are capable of near-real-time operation, while the SegFormer-based models are not. All four models outperformed at least 26 out of 28 human participants in pancreas segmentation. CONCLUSIONS: These results demonstrate that ML methods have the potential to provide relevant assistance in anatomy recognition in minimally invasive surgery in near-real-time. Future research should investigate the educational value and subsequent clinical impact of the respective assistance systems.
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spelling pubmed-105839312023-10-19 Anatomy segmentation in laparoscopic surgery: comparison of machine learning and human expertise – an experimental study Kolbinger, Fiona R. Rinner, Franziska M. Jenke, Alexander C. Carstens, Matthias Krell, Stefanie Leger, Stefan Distler, Marius Weitz, Jürgen Speidel, Stefanie Bodenstedt, Sebastian Int J Surg Original Research BACKGROUND: Lack of anatomy recognition represents a clinically relevant risk in abdominal surgery. Machine learning (ML) methods can help identify visible patterns and risk structures; however, their practical value remains largely unclear. MATERIALS AND METHODS: Based on a novel dataset of 13 195 laparoscopic images with pixel-wise segmentations of 11 anatomical structures, we developed specialized segmentation models for each structure and combined models for all anatomical structures using two state-of-the-art model architectures (DeepLabv3 and SegFormer) and compared segmentation performance of algorithms to a cohort of 28 physicians, medical students, and medical laypersons using the example of pancreas segmentation. RESULTS: Mean Intersection-over-Union for semantic segmentation of intra-abdominal structures ranged from 0.28 to 0.83 and from 0.23 to 0.77 for the DeepLabv3-based structure-specific and combined models, and from 0.31 to 0.85 and from 0.26 to 0.67 for the SegFormer-based structure-specific and combined models, respectively. Both the structure-specific and the combined DeepLabv3-based models are capable of near-real-time operation, while the SegFormer-based models are not. All four models outperformed at least 26 out of 28 human participants in pancreas segmentation. CONCLUSIONS: These results demonstrate that ML methods have the potential to provide relevant assistance in anatomy recognition in minimally invasive surgery in near-real-time. Future research should investigate the educational value and subsequent clinical impact of the respective assistance systems. Lippincott Williams & Wilkins 2023-07-31 /pmc/articles/PMC10583931/ /pubmed/37526099 http://dx.doi.org/10.1097/JS9.0000000000000595 Text en Copyright © 2023 The Author(s). Published by Wolters Kluwer Health, Inc. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution-Non Commercial-No Derivatives License 4.0 (https://creativecommons.org/licenses/by-nc-nd/4.0/) (CCBY-NC-ND), where it is permissible to download and share the work provided it is properly cited. The work cannot be changed in any way or used commercially without permission from the journal. http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/)
spellingShingle Original Research
Kolbinger, Fiona R.
Rinner, Franziska M.
Jenke, Alexander C.
Carstens, Matthias
Krell, Stefanie
Leger, Stefan
Distler, Marius
Weitz, Jürgen
Speidel, Stefanie
Bodenstedt, Sebastian
Anatomy segmentation in laparoscopic surgery: comparison of machine learning and human expertise – an experimental study
title Anatomy segmentation in laparoscopic surgery: comparison of machine learning and human expertise – an experimental study
title_full Anatomy segmentation in laparoscopic surgery: comparison of machine learning and human expertise – an experimental study
title_fullStr Anatomy segmentation in laparoscopic surgery: comparison of machine learning and human expertise – an experimental study
title_full_unstemmed Anatomy segmentation in laparoscopic surgery: comparison of machine learning and human expertise – an experimental study
title_short Anatomy segmentation in laparoscopic surgery: comparison of machine learning and human expertise – an experimental study
title_sort anatomy segmentation in laparoscopic surgery: comparison of machine learning and human expertise – an experimental study
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10583931/
https://www.ncbi.nlm.nih.gov/pubmed/37526099
http://dx.doi.org/10.1097/JS9.0000000000000595
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