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Identification of druggable genes for multiple myeloma based on genomic information

Multiple myeloma (MM) is a hematological malignancy. It is widely believed that genetic factors play a significant role in the development of MM, as investigated in numerous studies. However, the application of genomic information for clinical purposes, including diagnostic and prognostic biomarkers...

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Autores principales: Satria, Rahmat Dani, Irham, Lalu Muhammad, Adikusuma, Wirawan, Puspitaningrum, Anisa Nova, Afief, Arief Rahman, Khair, Riat El, Septama, Abdi Wira
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Korea Genome Organization 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10584652/
https://www.ncbi.nlm.nih.gov/pubmed/37813627
http://dx.doi.org/10.5808/gi.23011
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author Satria, Rahmat Dani
Irham, Lalu Muhammad
Adikusuma, Wirawan
Puspitaningrum, Anisa Nova
Afief, Arief Rahman
Khair, Riat El
Septama, Abdi Wira
author_facet Satria, Rahmat Dani
Irham, Lalu Muhammad
Adikusuma, Wirawan
Puspitaningrum, Anisa Nova
Afief, Arief Rahman
Khair, Riat El
Septama, Abdi Wira
author_sort Satria, Rahmat Dani
collection PubMed
description Multiple myeloma (MM) is a hematological malignancy. It is widely believed that genetic factors play a significant role in the development of MM, as investigated in numerous studies. However, the application of genomic information for clinical purposes, including diagnostic and prognostic biomarkers, remains largely confined to research. In this study, we utilized genetic information from the Genomic-Driven Clinical Implementation for Multiple Myeloma database, which is dedicated to clinical trial studies on MM. This genetic information was sourced from the genome-wide association studies catalog database. We prioritized genes with the potential to cause MM based on established annotations, as well as biological risk genes for MM, as potential drug target candidates. The DrugBank database was employed to identify drug candidates targeting these genes. Our research led to the discovery of 14 MM biological risk genes and the identification of 10 drugs that target three of these genes. Notably, only one of these 10 drugs, panobinostat, has been approved for use in MM. The two most promising genes, calcium signal-modulating cyclophilin ligand (CAMLG) and histone deacetylase 2 (HDAC2), were targeted by four drugs (cyclosporine, belinostat, vorinostat, and romidepsin), all of which have clinical evidence supporting their use in the treatment of MM. Interestingly, five of the 10 drugs have been approved for other indications than MM, but they may also be effective in treating MM. Therefore, this study aimed to clarify the genomic variants involved in the pathogenesis of MM and highlight the potential benefits of these genomic variants in drug discovery.
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spelling pubmed-105846522023-10-20 Identification of druggable genes for multiple myeloma based on genomic information Satria, Rahmat Dani Irham, Lalu Muhammad Adikusuma, Wirawan Puspitaningrum, Anisa Nova Afief, Arief Rahman Khair, Riat El Septama, Abdi Wira Genomics Inform Original Article Multiple myeloma (MM) is a hematological malignancy. It is widely believed that genetic factors play a significant role in the development of MM, as investigated in numerous studies. However, the application of genomic information for clinical purposes, including diagnostic and prognostic biomarkers, remains largely confined to research. In this study, we utilized genetic information from the Genomic-Driven Clinical Implementation for Multiple Myeloma database, which is dedicated to clinical trial studies on MM. This genetic information was sourced from the genome-wide association studies catalog database. We prioritized genes with the potential to cause MM based on established annotations, as well as biological risk genes for MM, as potential drug target candidates. The DrugBank database was employed to identify drug candidates targeting these genes. Our research led to the discovery of 14 MM biological risk genes and the identification of 10 drugs that target three of these genes. Notably, only one of these 10 drugs, panobinostat, has been approved for use in MM. The two most promising genes, calcium signal-modulating cyclophilin ligand (CAMLG) and histone deacetylase 2 (HDAC2), were targeted by four drugs (cyclosporine, belinostat, vorinostat, and romidepsin), all of which have clinical evidence supporting their use in the treatment of MM. Interestingly, five of the 10 drugs have been approved for other indications than MM, but they may also be effective in treating MM. Therefore, this study aimed to clarify the genomic variants involved in the pathogenesis of MM and highlight the potential benefits of these genomic variants in drug discovery. Korea Genome Organization 2023-09-27 /pmc/articles/PMC10584652/ /pubmed/37813627 http://dx.doi.org/10.5808/gi.23011 Text en (c) 2023, Korea Genome Organization https://creativecommons.org/licenses/by/4.0/(CC) This is an open-access article distributed under the terms of the Creative Commons Attribution license(https://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Article
Satria, Rahmat Dani
Irham, Lalu Muhammad
Adikusuma, Wirawan
Puspitaningrum, Anisa Nova
Afief, Arief Rahman
Khair, Riat El
Septama, Abdi Wira
Identification of druggable genes for multiple myeloma based on genomic information
title Identification of druggable genes for multiple myeloma based on genomic information
title_full Identification of druggable genes for multiple myeloma based on genomic information
title_fullStr Identification of druggable genes for multiple myeloma based on genomic information
title_full_unstemmed Identification of druggable genes for multiple myeloma based on genomic information
title_short Identification of druggable genes for multiple myeloma based on genomic information
title_sort identification of druggable genes for multiple myeloma based on genomic information
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10584652/
https://www.ncbi.nlm.nih.gov/pubmed/37813627
http://dx.doi.org/10.5808/gi.23011
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