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Form factor determination of biological molecules with X-ray free electron laser small-angle scattering (XFEL-SAS)

Free-electron lasers (FEL) are revolutionizing X-ray-based structural biology methods. While protein crystallography is already routinely performed at FELs, Small Angle X-ray Scattering (SAXS) studies of biological macromolecules are not as prevalent. SAXS allows the study of the shape and overall s...

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Autores principales: Blanchet, Clement E., Round, Adam, Mertens, Haydyn D. T., Ayyer, Kartik, Graewert, Melissa, Awel, Salah, Franke, Daniel, Dörner, Katerina, Bajt, Saša, Bean, Richard, Custódio, Tânia F., de Wijn, Raphael, Juncheng, E., Henkel, Alessandra, Gruzinov, Andrey, Jeffries, Cy M., Kim, Yoonhee, Kirkwood, Henry, Kloos, Marco, Knoška, Juraj, Koliyadu, Jayanath, Letrun, Romain, Löw, Christian, Makroczyova, Jana, Mall, Abhishek, Meijers, Rob, Pena Murillo, Gisel Esperanza, Oberthür, Dominik, Round, Ekaterina, Seuring, Carolin, Sikorski, Marcin, Vagovic, Patrik, Valerio, Joana, Wollweber, Tamme, Zhuang, Yulong, Schulz, Joachim, Haas, Heinrich, Chapman, Henry N., Mancuso, Adrian P., Svergun, Dmitri
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10585004/
https://www.ncbi.nlm.nih.gov/pubmed/37853181
http://dx.doi.org/10.1038/s42003-023-05416-7
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author Blanchet, Clement E.
Round, Adam
Mertens, Haydyn D. T.
Ayyer, Kartik
Graewert, Melissa
Awel, Salah
Franke, Daniel
Dörner, Katerina
Bajt, Saša
Bean, Richard
Custódio, Tânia F.
de Wijn, Raphael
Juncheng, E.
Henkel, Alessandra
Gruzinov, Andrey
Jeffries, Cy M.
Kim, Yoonhee
Kirkwood, Henry
Kloos, Marco
Knoška, Juraj
Koliyadu, Jayanath
Letrun, Romain
Löw, Christian
Makroczyova, Jana
Mall, Abhishek
Meijers, Rob
Pena Murillo, Gisel Esperanza
Oberthür, Dominik
Round, Ekaterina
Seuring, Carolin
Sikorski, Marcin
Vagovic, Patrik
Valerio, Joana
Wollweber, Tamme
Zhuang, Yulong
Schulz, Joachim
Haas, Heinrich
Chapman, Henry N.
Mancuso, Adrian P.
Svergun, Dmitri
author_facet Blanchet, Clement E.
Round, Adam
Mertens, Haydyn D. T.
Ayyer, Kartik
Graewert, Melissa
Awel, Salah
Franke, Daniel
Dörner, Katerina
Bajt, Saša
Bean, Richard
Custódio, Tânia F.
de Wijn, Raphael
Juncheng, E.
Henkel, Alessandra
Gruzinov, Andrey
Jeffries, Cy M.
Kim, Yoonhee
Kirkwood, Henry
Kloos, Marco
Knoška, Juraj
Koliyadu, Jayanath
Letrun, Romain
Löw, Christian
Makroczyova, Jana
Mall, Abhishek
Meijers, Rob
Pena Murillo, Gisel Esperanza
Oberthür, Dominik
Round, Ekaterina
Seuring, Carolin
Sikorski, Marcin
Vagovic, Patrik
Valerio, Joana
Wollweber, Tamme
Zhuang, Yulong
Schulz, Joachim
Haas, Heinrich
Chapman, Henry N.
Mancuso, Adrian P.
Svergun, Dmitri
author_sort Blanchet, Clement E.
collection PubMed
description Free-electron lasers (FEL) are revolutionizing X-ray-based structural biology methods. While protein crystallography is already routinely performed at FELs, Small Angle X-ray Scattering (SAXS) studies of biological macromolecules are not as prevalent. SAXS allows the study of the shape and overall structure of proteins and nucleic acids in solution, in a quasi-native environment. In solution, chemical and biophysical parameters that have an influence on the structure and dynamics of molecules can be varied and their effect on conformational changes can be monitored in time-resolved XFEL and SAXS experiments. We report here the collection of scattering form factors of proteins in solution using FEL X-rays. The form factors correspond to the scattering signal of the protein ensemble alone; the scattering contributions from the solvent and the instrument are separately measured and accurately subtracted. The experiment was done using a liquid jet for sample delivery. These results pave the way for time-resolved studies and measurements from dilute samples, capitalizing on the intense and short FEL X-ray pulses.
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spelling pubmed-105850042023-10-20 Form factor determination of biological molecules with X-ray free electron laser small-angle scattering (XFEL-SAS) Blanchet, Clement E. Round, Adam Mertens, Haydyn D. T. Ayyer, Kartik Graewert, Melissa Awel, Salah Franke, Daniel Dörner, Katerina Bajt, Saša Bean, Richard Custódio, Tânia F. de Wijn, Raphael Juncheng, E. Henkel, Alessandra Gruzinov, Andrey Jeffries, Cy M. Kim, Yoonhee Kirkwood, Henry Kloos, Marco Knoška, Juraj Koliyadu, Jayanath Letrun, Romain Löw, Christian Makroczyova, Jana Mall, Abhishek Meijers, Rob Pena Murillo, Gisel Esperanza Oberthür, Dominik Round, Ekaterina Seuring, Carolin Sikorski, Marcin Vagovic, Patrik Valerio, Joana Wollweber, Tamme Zhuang, Yulong Schulz, Joachim Haas, Heinrich Chapman, Henry N. Mancuso, Adrian P. Svergun, Dmitri Commun Biol Article Free-electron lasers (FEL) are revolutionizing X-ray-based structural biology methods. While protein crystallography is already routinely performed at FELs, Small Angle X-ray Scattering (SAXS) studies of biological macromolecules are not as prevalent. SAXS allows the study of the shape and overall structure of proteins and nucleic acids in solution, in a quasi-native environment. In solution, chemical and biophysical parameters that have an influence on the structure and dynamics of molecules can be varied and their effect on conformational changes can be monitored in time-resolved XFEL and SAXS experiments. We report here the collection of scattering form factors of proteins in solution using FEL X-rays. The form factors correspond to the scattering signal of the protein ensemble alone; the scattering contributions from the solvent and the instrument are separately measured and accurately subtracted. The experiment was done using a liquid jet for sample delivery. These results pave the way for time-resolved studies and measurements from dilute samples, capitalizing on the intense and short FEL X-ray pulses. Nature Publishing Group UK 2023-10-18 /pmc/articles/PMC10585004/ /pubmed/37853181 http://dx.doi.org/10.1038/s42003-023-05416-7 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Blanchet, Clement E.
Round, Adam
Mertens, Haydyn D. T.
Ayyer, Kartik
Graewert, Melissa
Awel, Salah
Franke, Daniel
Dörner, Katerina
Bajt, Saša
Bean, Richard
Custódio, Tânia F.
de Wijn, Raphael
Juncheng, E.
Henkel, Alessandra
Gruzinov, Andrey
Jeffries, Cy M.
Kim, Yoonhee
Kirkwood, Henry
Kloos, Marco
Knoška, Juraj
Koliyadu, Jayanath
Letrun, Romain
Löw, Christian
Makroczyova, Jana
Mall, Abhishek
Meijers, Rob
Pena Murillo, Gisel Esperanza
Oberthür, Dominik
Round, Ekaterina
Seuring, Carolin
Sikorski, Marcin
Vagovic, Patrik
Valerio, Joana
Wollweber, Tamme
Zhuang, Yulong
Schulz, Joachim
Haas, Heinrich
Chapman, Henry N.
Mancuso, Adrian P.
Svergun, Dmitri
Form factor determination of biological molecules with X-ray free electron laser small-angle scattering (XFEL-SAS)
title Form factor determination of biological molecules with X-ray free electron laser small-angle scattering (XFEL-SAS)
title_full Form factor determination of biological molecules with X-ray free electron laser small-angle scattering (XFEL-SAS)
title_fullStr Form factor determination of biological molecules with X-ray free electron laser small-angle scattering (XFEL-SAS)
title_full_unstemmed Form factor determination of biological molecules with X-ray free electron laser small-angle scattering (XFEL-SAS)
title_short Form factor determination of biological molecules with X-ray free electron laser small-angle scattering (XFEL-SAS)
title_sort form factor determination of biological molecules with x-ray free electron laser small-angle scattering (xfel-sas)
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10585004/
https://www.ncbi.nlm.nih.gov/pubmed/37853181
http://dx.doi.org/10.1038/s42003-023-05416-7
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