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Form factor determination of biological molecules with X-ray free electron laser small-angle scattering (XFEL-SAS)
Free-electron lasers (FEL) are revolutionizing X-ray-based structural biology methods. While protein crystallography is already routinely performed at FELs, Small Angle X-ray Scattering (SAXS) studies of biological macromolecules are not as prevalent. SAXS allows the study of the shape and overall s...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10585004/ https://www.ncbi.nlm.nih.gov/pubmed/37853181 http://dx.doi.org/10.1038/s42003-023-05416-7 |
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author | Blanchet, Clement E. Round, Adam Mertens, Haydyn D. T. Ayyer, Kartik Graewert, Melissa Awel, Salah Franke, Daniel Dörner, Katerina Bajt, Saša Bean, Richard Custódio, Tânia F. de Wijn, Raphael Juncheng, E. Henkel, Alessandra Gruzinov, Andrey Jeffries, Cy M. Kim, Yoonhee Kirkwood, Henry Kloos, Marco Knoška, Juraj Koliyadu, Jayanath Letrun, Romain Löw, Christian Makroczyova, Jana Mall, Abhishek Meijers, Rob Pena Murillo, Gisel Esperanza Oberthür, Dominik Round, Ekaterina Seuring, Carolin Sikorski, Marcin Vagovic, Patrik Valerio, Joana Wollweber, Tamme Zhuang, Yulong Schulz, Joachim Haas, Heinrich Chapman, Henry N. Mancuso, Adrian P. Svergun, Dmitri |
author_facet | Blanchet, Clement E. Round, Adam Mertens, Haydyn D. T. Ayyer, Kartik Graewert, Melissa Awel, Salah Franke, Daniel Dörner, Katerina Bajt, Saša Bean, Richard Custódio, Tânia F. de Wijn, Raphael Juncheng, E. Henkel, Alessandra Gruzinov, Andrey Jeffries, Cy M. Kim, Yoonhee Kirkwood, Henry Kloos, Marco Knoška, Juraj Koliyadu, Jayanath Letrun, Romain Löw, Christian Makroczyova, Jana Mall, Abhishek Meijers, Rob Pena Murillo, Gisel Esperanza Oberthür, Dominik Round, Ekaterina Seuring, Carolin Sikorski, Marcin Vagovic, Patrik Valerio, Joana Wollweber, Tamme Zhuang, Yulong Schulz, Joachim Haas, Heinrich Chapman, Henry N. Mancuso, Adrian P. Svergun, Dmitri |
author_sort | Blanchet, Clement E. |
collection | PubMed |
description | Free-electron lasers (FEL) are revolutionizing X-ray-based structural biology methods. While protein crystallography is already routinely performed at FELs, Small Angle X-ray Scattering (SAXS) studies of biological macromolecules are not as prevalent. SAXS allows the study of the shape and overall structure of proteins and nucleic acids in solution, in a quasi-native environment. In solution, chemical and biophysical parameters that have an influence on the structure and dynamics of molecules can be varied and their effect on conformational changes can be monitored in time-resolved XFEL and SAXS experiments. We report here the collection of scattering form factors of proteins in solution using FEL X-rays. The form factors correspond to the scattering signal of the protein ensemble alone; the scattering contributions from the solvent and the instrument are separately measured and accurately subtracted. The experiment was done using a liquid jet for sample delivery. These results pave the way for time-resolved studies and measurements from dilute samples, capitalizing on the intense and short FEL X-ray pulses. |
format | Online Article Text |
id | pubmed-10585004 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-105850042023-10-20 Form factor determination of biological molecules with X-ray free electron laser small-angle scattering (XFEL-SAS) Blanchet, Clement E. Round, Adam Mertens, Haydyn D. T. Ayyer, Kartik Graewert, Melissa Awel, Salah Franke, Daniel Dörner, Katerina Bajt, Saša Bean, Richard Custódio, Tânia F. de Wijn, Raphael Juncheng, E. Henkel, Alessandra Gruzinov, Andrey Jeffries, Cy M. Kim, Yoonhee Kirkwood, Henry Kloos, Marco Knoška, Juraj Koliyadu, Jayanath Letrun, Romain Löw, Christian Makroczyova, Jana Mall, Abhishek Meijers, Rob Pena Murillo, Gisel Esperanza Oberthür, Dominik Round, Ekaterina Seuring, Carolin Sikorski, Marcin Vagovic, Patrik Valerio, Joana Wollweber, Tamme Zhuang, Yulong Schulz, Joachim Haas, Heinrich Chapman, Henry N. Mancuso, Adrian P. Svergun, Dmitri Commun Biol Article Free-electron lasers (FEL) are revolutionizing X-ray-based structural biology methods. While protein crystallography is already routinely performed at FELs, Small Angle X-ray Scattering (SAXS) studies of biological macromolecules are not as prevalent. SAXS allows the study of the shape and overall structure of proteins and nucleic acids in solution, in a quasi-native environment. In solution, chemical and biophysical parameters that have an influence on the structure and dynamics of molecules can be varied and their effect on conformational changes can be monitored in time-resolved XFEL and SAXS experiments. We report here the collection of scattering form factors of proteins in solution using FEL X-rays. The form factors correspond to the scattering signal of the protein ensemble alone; the scattering contributions from the solvent and the instrument are separately measured and accurately subtracted. The experiment was done using a liquid jet for sample delivery. These results pave the way for time-resolved studies and measurements from dilute samples, capitalizing on the intense and short FEL X-ray pulses. Nature Publishing Group UK 2023-10-18 /pmc/articles/PMC10585004/ /pubmed/37853181 http://dx.doi.org/10.1038/s42003-023-05416-7 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Blanchet, Clement E. Round, Adam Mertens, Haydyn D. T. Ayyer, Kartik Graewert, Melissa Awel, Salah Franke, Daniel Dörner, Katerina Bajt, Saša Bean, Richard Custódio, Tânia F. de Wijn, Raphael Juncheng, E. Henkel, Alessandra Gruzinov, Andrey Jeffries, Cy M. Kim, Yoonhee Kirkwood, Henry Kloos, Marco Knoška, Juraj Koliyadu, Jayanath Letrun, Romain Löw, Christian Makroczyova, Jana Mall, Abhishek Meijers, Rob Pena Murillo, Gisel Esperanza Oberthür, Dominik Round, Ekaterina Seuring, Carolin Sikorski, Marcin Vagovic, Patrik Valerio, Joana Wollweber, Tamme Zhuang, Yulong Schulz, Joachim Haas, Heinrich Chapman, Henry N. Mancuso, Adrian P. Svergun, Dmitri Form factor determination of biological molecules with X-ray free electron laser small-angle scattering (XFEL-SAS) |
title | Form factor determination of biological molecules with X-ray free electron laser small-angle scattering (XFEL-SAS) |
title_full | Form factor determination of biological molecules with X-ray free electron laser small-angle scattering (XFEL-SAS) |
title_fullStr | Form factor determination of biological molecules with X-ray free electron laser small-angle scattering (XFEL-SAS) |
title_full_unstemmed | Form factor determination of biological molecules with X-ray free electron laser small-angle scattering (XFEL-SAS) |
title_short | Form factor determination of biological molecules with X-ray free electron laser small-angle scattering (XFEL-SAS) |
title_sort | form factor determination of biological molecules with x-ray free electron laser small-angle scattering (xfel-sas) |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10585004/ https://www.ncbi.nlm.nih.gov/pubmed/37853181 http://dx.doi.org/10.1038/s42003-023-05416-7 |
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