Cargando…

Advances in wildlife abundance estimation using pedigree reconstruction

The conservation and management of wildlife populations, particularly for threatened and endangered species are greatly aided with abundance, growth rate, and density measures. Traditional methods of estimating abundance and related metrics represent trade‐offs in effort and precision of estimates....

Descripción completa

Detalles Bibliográficos
Autores principales: Rosenblatt, Elias, Creel, Scott, Gieder, Katherina, Murdoch, James, Donovan, Therese
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10585057/
https://www.ncbi.nlm.nih.gov/pubmed/37869434
http://dx.doi.org/10.1002/ece3.10650
_version_ 1785122869826551808
author Rosenblatt, Elias
Creel, Scott
Gieder, Katherina
Murdoch, James
Donovan, Therese
author_facet Rosenblatt, Elias
Creel, Scott
Gieder, Katherina
Murdoch, James
Donovan, Therese
author_sort Rosenblatt, Elias
collection PubMed
description The conservation and management of wildlife populations, particularly for threatened and endangered species are greatly aided with abundance, growth rate, and density measures. Traditional methods of estimating abundance and related metrics represent trade‐offs in effort and precision of estimates. Pedigree reconstruction is an emerging, attractive alternate approach because its use of one‐time, noninvasive sampling of individuals to infer the existence of unsampled individuals. However, advances in pedigree reconstruction could improve its utility, including forming a measure of precision for the method, establishing required spatial sampling effort for accurate estimates, ascertaining the spatial extent of abundance estimates derived from pedigree reconstruction, and assessing how population density affects the estimator's performance. Using established relationships for a stochastic, spatially explicit simulated moose (Alces americanus) population, pedigree reconstruction provided accurate estimates of the adult moose population size and trend. Novel bootstrapped confidence intervals performed as expected with intensive sampling but underperformed with moderate sampling efforts that could produce abundance estimates with low bias. Adult population estimates more closely reflected the total number of adults in the extant population, rather than number of adults inhabiting the area where sampling occurred. Increasing sampling effort, measured as the proportion of individuals sampled and as the proportion of a hypothetical study area, yielded similar asymptotic patterns over time. Simulations indicated a positive relationship between animal density and sampling effort required for unbiased estimates. These results indicate that pedigree reconstruction can produce accurate abundance estimates and may be particularly valuable for surveying smaller areas and low‐density populations.
format Online
Article
Text
id pubmed-10585057
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher John Wiley and Sons Inc.
record_format MEDLINE/PubMed
spelling pubmed-105850572023-10-20 Advances in wildlife abundance estimation using pedigree reconstruction Rosenblatt, Elias Creel, Scott Gieder, Katherina Murdoch, James Donovan, Therese Ecol Evol Research Articles The conservation and management of wildlife populations, particularly for threatened and endangered species are greatly aided with abundance, growth rate, and density measures. Traditional methods of estimating abundance and related metrics represent trade‐offs in effort and precision of estimates. Pedigree reconstruction is an emerging, attractive alternate approach because its use of one‐time, noninvasive sampling of individuals to infer the existence of unsampled individuals. However, advances in pedigree reconstruction could improve its utility, including forming a measure of precision for the method, establishing required spatial sampling effort for accurate estimates, ascertaining the spatial extent of abundance estimates derived from pedigree reconstruction, and assessing how population density affects the estimator's performance. Using established relationships for a stochastic, spatially explicit simulated moose (Alces americanus) population, pedigree reconstruction provided accurate estimates of the adult moose population size and trend. Novel bootstrapped confidence intervals performed as expected with intensive sampling but underperformed with moderate sampling efforts that could produce abundance estimates with low bias. Adult population estimates more closely reflected the total number of adults in the extant population, rather than number of adults inhabiting the area where sampling occurred. Increasing sampling effort, measured as the proportion of individuals sampled and as the proportion of a hypothetical study area, yielded similar asymptotic patterns over time. Simulations indicated a positive relationship between animal density and sampling effort required for unbiased estimates. These results indicate that pedigree reconstruction can produce accurate abundance estimates and may be particularly valuable for surveying smaller areas and low‐density populations. John Wiley and Sons Inc. 2023-10-18 /pmc/articles/PMC10585057/ /pubmed/37869434 http://dx.doi.org/10.1002/ece3.10650 Text en © 2023 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Rosenblatt, Elias
Creel, Scott
Gieder, Katherina
Murdoch, James
Donovan, Therese
Advances in wildlife abundance estimation using pedigree reconstruction
title Advances in wildlife abundance estimation using pedigree reconstruction
title_full Advances in wildlife abundance estimation using pedigree reconstruction
title_fullStr Advances in wildlife abundance estimation using pedigree reconstruction
title_full_unstemmed Advances in wildlife abundance estimation using pedigree reconstruction
title_short Advances in wildlife abundance estimation using pedigree reconstruction
title_sort advances in wildlife abundance estimation using pedigree reconstruction
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10585057/
https://www.ncbi.nlm.nih.gov/pubmed/37869434
http://dx.doi.org/10.1002/ece3.10650
work_keys_str_mv AT rosenblattelias advancesinwildlifeabundanceestimationusingpedigreereconstruction
AT creelscott advancesinwildlifeabundanceestimationusingpedigreereconstruction
AT giederkatherina advancesinwildlifeabundanceestimationusingpedigreereconstruction
AT murdochjames advancesinwildlifeabundanceestimationusingpedigreereconstruction
AT donovantherese advancesinwildlifeabundanceestimationusingpedigreereconstruction