Cargando…

A plasma miRNA-based classifier for small cell lung cancer diagnosis

INTRODUCTION: Small cell lung cancer (SCLC) is characterized by poor prognosis and challenging diagnosis. Screening in high-risk smokers results in a reduction in lung cancer mortality, however, screening efforts are primarily focused on non-small cell lung cancer (NSCLC). SCLC diagnosis and surveil...

Descripción completa

Detalles Bibliográficos
Autores principales: Saviana, Michela, Romano, Giulia, McElroy, Joseph, Nigita, Giovanni, Distefano, Rosario, Toft, Robin, Calore, Federica, Le, Patricia, Morales, Daniel Del Valle, Atmajoana, Sarah, Deppen, Stephen, Wang, Kai, Lee, L. James, Acunzo, Mario, Nana-Sinkam, Patrick
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10585112/
https://www.ncbi.nlm.nih.gov/pubmed/37869089
http://dx.doi.org/10.3389/fonc.2023.1255527
_version_ 1785122884141711360
author Saviana, Michela
Romano, Giulia
McElroy, Joseph
Nigita, Giovanni
Distefano, Rosario
Toft, Robin
Calore, Federica
Le, Patricia
Morales, Daniel Del Valle
Atmajoana, Sarah
Deppen, Stephen
Wang, Kai
Lee, L. James
Acunzo, Mario
Nana-Sinkam, Patrick
author_facet Saviana, Michela
Romano, Giulia
McElroy, Joseph
Nigita, Giovanni
Distefano, Rosario
Toft, Robin
Calore, Federica
Le, Patricia
Morales, Daniel Del Valle
Atmajoana, Sarah
Deppen, Stephen
Wang, Kai
Lee, L. James
Acunzo, Mario
Nana-Sinkam, Patrick
author_sort Saviana, Michela
collection PubMed
description INTRODUCTION: Small cell lung cancer (SCLC) is characterized by poor prognosis and challenging diagnosis. Screening in high-risk smokers results in a reduction in lung cancer mortality, however, screening efforts are primarily focused on non-small cell lung cancer (NSCLC). SCLC diagnosis and surveillance remain significant challenges. The aberrant expression of circulating microRNAs (miRNAs/miRs) is reported in many tumors and can provide insights into the pathogenesis of tumor development and progression. Here, we conducted a comprehensive assessment of circulating miRNAs in SCLC with a goal of developing a miRNA-based classifier to assist in SCLC diagnoses. METHODS: We profiled deregulated circulating cell-free miRNAs in the plasma of SCLC patients. We tested selected miRNAs on a training cohort and created a classifier by integrating miRNA expression and patients’ clinical data. Finally, we applied the classifier on a validation dataset. RESULTS: We determined that miR-375-3p can discriminate between SCLC and NSCLC patients, and between SCLC and Squamous Cell Carcinoma patients. Moreover, we found that a model comprising miR-375-3p, miR-320b, and miR-144-3p can be integrated with race and age to distinguish metastatic SCLC from a control group. DISCUSSION: This study proposes a miRNA-based biomarker classifier for SCLC that considers clinical demographics with specific cut offs to inform SCLC diagnosis.
format Online
Article
Text
id pubmed-10585112
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-105851122023-10-20 A plasma miRNA-based classifier for small cell lung cancer diagnosis Saviana, Michela Romano, Giulia McElroy, Joseph Nigita, Giovanni Distefano, Rosario Toft, Robin Calore, Federica Le, Patricia Morales, Daniel Del Valle Atmajoana, Sarah Deppen, Stephen Wang, Kai Lee, L. James Acunzo, Mario Nana-Sinkam, Patrick Front Oncol Oncology INTRODUCTION: Small cell lung cancer (SCLC) is characterized by poor prognosis and challenging diagnosis. Screening in high-risk smokers results in a reduction in lung cancer mortality, however, screening efforts are primarily focused on non-small cell lung cancer (NSCLC). SCLC diagnosis and surveillance remain significant challenges. The aberrant expression of circulating microRNAs (miRNAs/miRs) is reported in many tumors and can provide insights into the pathogenesis of tumor development and progression. Here, we conducted a comprehensive assessment of circulating miRNAs in SCLC with a goal of developing a miRNA-based classifier to assist in SCLC diagnoses. METHODS: We profiled deregulated circulating cell-free miRNAs in the plasma of SCLC patients. We tested selected miRNAs on a training cohort and created a classifier by integrating miRNA expression and patients’ clinical data. Finally, we applied the classifier on a validation dataset. RESULTS: We determined that miR-375-3p can discriminate between SCLC and NSCLC patients, and between SCLC and Squamous Cell Carcinoma patients. Moreover, we found that a model comprising miR-375-3p, miR-320b, and miR-144-3p can be integrated with race and age to distinguish metastatic SCLC from a control group. DISCUSSION: This study proposes a miRNA-based biomarker classifier for SCLC that considers clinical demographics with specific cut offs to inform SCLC diagnosis. Frontiers Media S.A. 2023-10-05 /pmc/articles/PMC10585112/ /pubmed/37869089 http://dx.doi.org/10.3389/fonc.2023.1255527 Text en Copyright © 2023 Saviana, Romano, McElroy, Nigita, Distefano, Toft, Calore, Le, Morales, Atmajoana, Deppen, Wang, Lee, Acunzo and Nana-Sinkam https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Oncology
Saviana, Michela
Romano, Giulia
McElroy, Joseph
Nigita, Giovanni
Distefano, Rosario
Toft, Robin
Calore, Federica
Le, Patricia
Morales, Daniel Del Valle
Atmajoana, Sarah
Deppen, Stephen
Wang, Kai
Lee, L. James
Acunzo, Mario
Nana-Sinkam, Patrick
A plasma miRNA-based classifier for small cell lung cancer diagnosis
title A plasma miRNA-based classifier for small cell lung cancer diagnosis
title_full A plasma miRNA-based classifier for small cell lung cancer diagnosis
title_fullStr A plasma miRNA-based classifier for small cell lung cancer diagnosis
title_full_unstemmed A plasma miRNA-based classifier for small cell lung cancer diagnosis
title_short A plasma miRNA-based classifier for small cell lung cancer diagnosis
title_sort plasma mirna-based classifier for small cell lung cancer diagnosis
topic Oncology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10585112/
https://www.ncbi.nlm.nih.gov/pubmed/37869089
http://dx.doi.org/10.3389/fonc.2023.1255527
work_keys_str_mv AT savianamichela aplasmamirnabasedclassifierforsmallcelllungcancerdiagnosis
AT romanogiulia aplasmamirnabasedclassifierforsmallcelllungcancerdiagnosis
AT mcelroyjoseph aplasmamirnabasedclassifierforsmallcelllungcancerdiagnosis
AT nigitagiovanni aplasmamirnabasedclassifierforsmallcelllungcancerdiagnosis
AT distefanorosario aplasmamirnabasedclassifierforsmallcelllungcancerdiagnosis
AT toftrobin aplasmamirnabasedclassifierforsmallcelllungcancerdiagnosis
AT calorefederica aplasmamirnabasedclassifierforsmallcelllungcancerdiagnosis
AT lepatricia aplasmamirnabasedclassifierforsmallcelllungcancerdiagnosis
AT moralesdanieldelvalle aplasmamirnabasedclassifierforsmallcelllungcancerdiagnosis
AT atmajoanasarah aplasmamirnabasedclassifierforsmallcelllungcancerdiagnosis
AT deppenstephen aplasmamirnabasedclassifierforsmallcelllungcancerdiagnosis
AT wangkai aplasmamirnabasedclassifierforsmallcelllungcancerdiagnosis
AT leeljames aplasmamirnabasedclassifierforsmallcelllungcancerdiagnosis
AT acunzomario aplasmamirnabasedclassifierforsmallcelllungcancerdiagnosis
AT nanasinkampatrick aplasmamirnabasedclassifierforsmallcelllungcancerdiagnosis
AT savianamichela plasmamirnabasedclassifierforsmallcelllungcancerdiagnosis
AT romanogiulia plasmamirnabasedclassifierforsmallcelllungcancerdiagnosis
AT mcelroyjoseph plasmamirnabasedclassifierforsmallcelllungcancerdiagnosis
AT nigitagiovanni plasmamirnabasedclassifierforsmallcelllungcancerdiagnosis
AT distefanorosario plasmamirnabasedclassifierforsmallcelllungcancerdiagnosis
AT toftrobin plasmamirnabasedclassifierforsmallcelllungcancerdiagnosis
AT calorefederica plasmamirnabasedclassifierforsmallcelllungcancerdiagnosis
AT lepatricia plasmamirnabasedclassifierforsmallcelllungcancerdiagnosis
AT moralesdanieldelvalle plasmamirnabasedclassifierforsmallcelllungcancerdiagnosis
AT atmajoanasarah plasmamirnabasedclassifierforsmallcelllungcancerdiagnosis
AT deppenstephen plasmamirnabasedclassifierforsmallcelllungcancerdiagnosis
AT wangkai plasmamirnabasedclassifierforsmallcelllungcancerdiagnosis
AT leeljames plasmamirnabasedclassifierforsmallcelllungcancerdiagnosis
AT acunzomario plasmamirnabasedclassifierforsmallcelllungcancerdiagnosis
AT nanasinkampatrick plasmamirnabasedclassifierforsmallcelllungcancerdiagnosis