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Synthesis, Antifungal Ergosterol Inhibition, Antibiofilm Activities, and Molecular Docking on β-Tubulin and Sterol 14-Alpha Demethylase along with DFT-Based Quantum Mechanical Calculation of Pyrazole Containing Fused Pyridine–Pyrimidine Derivatives
[Image: see text] Multidrug-resistant fungal infections have become much more common in recent years, especially in immune-compromised patients. Therefore, researchers and pharmaceutical professionals have focused on the development of novel antifungal agents that can tackle the problem of resistanc...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2023
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10586022/ https://www.ncbi.nlm.nih.gov/pubmed/37867649 http://dx.doi.org/10.1021/acsomega.3c01722 |
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author | Desai, Nisheeth C. Khasiya, Ashvinkumar G. Jadeja, Dharmpalsinh J. Monapara, Jahnvi D. Jethawa, Aratiba M. Dave, Bharti P. Sivan, Sree Kanth Manga, Vijjulatha Mhaske, Pravin C. Chaudhary, Doongar R. |
author_facet | Desai, Nisheeth C. Khasiya, Ashvinkumar G. Jadeja, Dharmpalsinh J. Monapara, Jahnvi D. Jethawa, Aratiba M. Dave, Bharti P. Sivan, Sree Kanth Manga, Vijjulatha Mhaske, Pravin C. Chaudhary, Doongar R. |
author_sort | Desai, Nisheeth C. |
collection | PubMed |
description | [Image: see text] Multidrug-resistant fungal infections have become much more common in recent years, especially in immune-compromised patients. Therefore, researchers and pharmaceutical professionals have focused on the development of novel antifungal agents that can tackle the problem of resistance. In continuation to this, a novel series of pyrazole-bearing pyrido[2,3-d]pyrimidine-2,4(1H,3H)-dione derivatives (4a–4o) have been developed. These compounds have been screened against Candida albicans, Aspergillus niger, and Aspergillus clavatus. The synthesized compounds were characterized by well-known spectroscopic techniques, i.e., IR, (1)H NMR, (13)C NMR, and mass spectrometry. In vitro antifungal results revealed that compound 4n showed activity against C. albicans having MIC value of 200 μg/mL. To know the plausible mode of action, the active derivatives were screened for anti-biofilm and ergosterol biosynthesis inhibition activities. The compounds 4h, 4j, 4k, and 4n showed greater ergosterol biosynthesis inhibition than the control DMSO. To comprehend how molecules interact with the receptor, studies of molecular docking of 4k and 4n have been performed on the homology-modeled protein of β-tubulin. The molecular docking revealed that the active compounds 4h, 4j, 4k, 4l, and 4n interacting with the active site amino acid of sterol 14-alpha demethylase (PDB ID: 5v5z) indicate one of the possible modes of action of ergosterol inhibition activity. The synthesized compounds 4c, 4e, 4h, 4i, 4j, 4k, 4l, and 4n inhibited biofilm formation and possessed the potential for anti-biofilm activity. DFT-based quantum mechanical calculations were carried out to optimize, predict, and compare the vibration modes of the molecule 4a. |
format | Online Article Text |
id | pubmed-10586022 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-105860222023-10-20 Synthesis, Antifungal Ergosterol Inhibition, Antibiofilm Activities, and Molecular Docking on β-Tubulin and Sterol 14-Alpha Demethylase along with DFT-Based Quantum Mechanical Calculation of Pyrazole Containing Fused Pyridine–Pyrimidine Derivatives Desai, Nisheeth C. Khasiya, Ashvinkumar G. Jadeja, Dharmpalsinh J. Monapara, Jahnvi D. Jethawa, Aratiba M. Dave, Bharti P. Sivan, Sree Kanth Manga, Vijjulatha Mhaske, Pravin C. Chaudhary, Doongar R. ACS Omega [Image: see text] Multidrug-resistant fungal infections have become much more common in recent years, especially in immune-compromised patients. Therefore, researchers and pharmaceutical professionals have focused on the development of novel antifungal agents that can tackle the problem of resistance. In continuation to this, a novel series of pyrazole-bearing pyrido[2,3-d]pyrimidine-2,4(1H,3H)-dione derivatives (4a–4o) have been developed. These compounds have been screened against Candida albicans, Aspergillus niger, and Aspergillus clavatus. The synthesized compounds were characterized by well-known spectroscopic techniques, i.e., IR, (1)H NMR, (13)C NMR, and mass spectrometry. In vitro antifungal results revealed that compound 4n showed activity against C. albicans having MIC value of 200 μg/mL. To know the plausible mode of action, the active derivatives were screened for anti-biofilm and ergosterol biosynthesis inhibition activities. The compounds 4h, 4j, 4k, and 4n showed greater ergosterol biosynthesis inhibition than the control DMSO. To comprehend how molecules interact with the receptor, studies of molecular docking of 4k and 4n have been performed on the homology-modeled protein of β-tubulin. The molecular docking revealed that the active compounds 4h, 4j, 4k, 4l, and 4n interacting with the active site amino acid of sterol 14-alpha demethylase (PDB ID: 5v5z) indicate one of the possible modes of action of ergosterol inhibition activity. The synthesized compounds 4c, 4e, 4h, 4i, 4j, 4k, 4l, and 4n inhibited biofilm formation and possessed the potential for anti-biofilm activity. DFT-based quantum mechanical calculations were carried out to optimize, predict, and compare the vibration modes of the molecule 4a. American Chemical Society 2023-10-06 /pmc/articles/PMC10586022/ /pubmed/37867649 http://dx.doi.org/10.1021/acsomega.3c01722 Text en © 2023 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by-nc-nd/4.0/Permits non-commercial access and re-use, provided that author attribution and integrity are maintained; but does not permit creation of adaptations or other derivative works (https://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Desai, Nisheeth C. Khasiya, Ashvinkumar G. Jadeja, Dharmpalsinh J. Monapara, Jahnvi D. Jethawa, Aratiba M. Dave, Bharti P. Sivan, Sree Kanth Manga, Vijjulatha Mhaske, Pravin C. Chaudhary, Doongar R. Synthesis, Antifungal Ergosterol Inhibition, Antibiofilm Activities, and Molecular Docking on β-Tubulin and Sterol 14-Alpha Demethylase along with DFT-Based Quantum Mechanical Calculation of Pyrazole Containing Fused Pyridine–Pyrimidine Derivatives |
title | Synthesis, Antifungal
Ergosterol Inhibition, Antibiofilm
Activities, and Molecular Docking on β-Tubulin and Sterol
14-Alpha Demethylase along with DFT-Based Quantum Mechanical Calculation
of Pyrazole Containing Fused Pyridine–Pyrimidine Derivatives |
title_full | Synthesis, Antifungal
Ergosterol Inhibition, Antibiofilm
Activities, and Molecular Docking on β-Tubulin and Sterol
14-Alpha Demethylase along with DFT-Based Quantum Mechanical Calculation
of Pyrazole Containing Fused Pyridine–Pyrimidine Derivatives |
title_fullStr | Synthesis, Antifungal
Ergosterol Inhibition, Antibiofilm
Activities, and Molecular Docking on β-Tubulin and Sterol
14-Alpha Demethylase along with DFT-Based Quantum Mechanical Calculation
of Pyrazole Containing Fused Pyridine–Pyrimidine Derivatives |
title_full_unstemmed | Synthesis, Antifungal
Ergosterol Inhibition, Antibiofilm
Activities, and Molecular Docking on β-Tubulin and Sterol
14-Alpha Demethylase along with DFT-Based Quantum Mechanical Calculation
of Pyrazole Containing Fused Pyridine–Pyrimidine Derivatives |
title_short | Synthesis, Antifungal
Ergosterol Inhibition, Antibiofilm
Activities, and Molecular Docking on β-Tubulin and Sterol
14-Alpha Demethylase along with DFT-Based Quantum Mechanical Calculation
of Pyrazole Containing Fused Pyridine–Pyrimidine Derivatives |
title_sort | synthesis, antifungal
ergosterol inhibition, antibiofilm
activities, and molecular docking on β-tubulin and sterol
14-alpha demethylase along with dft-based quantum mechanical calculation
of pyrazole containing fused pyridine–pyrimidine derivatives |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10586022/ https://www.ncbi.nlm.nih.gov/pubmed/37867649 http://dx.doi.org/10.1021/acsomega.3c01722 |
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