Cargando…

Synthesis, Antifungal Ergosterol Inhibition, Antibiofilm Activities, and Molecular Docking on β-Tubulin and Sterol 14-Alpha Demethylase along with DFT-Based Quantum Mechanical Calculation of Pyrazole Containing Fused Pyridine–Pyrimidine Derivatives

[Image: see text] Multidrug-resistant fungal infections have become much more common in recent years, especially in immune-compromised patients. Therefore, researchers and pharmaceutical professionals have focused on the development of novel antifungal agents that can tackle the problem of resistanc...

Descripción completa

Detalles Bibliográficos
Autores principales: Desai, Nisheeth C., Khasiya, Ashvinkumar G., Jadeja, Dharmpalsinh J., Monapara, Jahnvi D., Jethawa, Aratiba M., Dave, Bharti P., Sivan, Sree Kanth, Manga, Vijjulatha, Mhaske, Pravin C., Chaudhary, Doongar R.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2023
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10586022/
https://www.ncbi.nlm.nih.gov/pubmed/37867649
http://dx.doi.org/10.1021/acsomega.3c01722
_version_ 1785123071608225792
author Desai, Nisheeth C.
Khasiya, Ashvinkumar G.
Jadeja, Dharmpalsinh J.
Monapara, Jahnvi D.
Jethawa, Aratiba M.
Dave, Bharti P.
Sivan, Sree Kanth
Manga, Vijjulatha
Mhaske, Pravin C.
Chaudhary, Doongar R.
author_facet Desai, Nisheeth C.
Khasiya, Ashvinkumar G.
Jadeja, Dharmpalsinh J.
Monapara, Jahnvi D.
Jethawa, Aratiba M.
Dave, Bharti P.
Sivan, Sree Kanth
Manga, Vijjulatha
Mhaske, Pravin C.
Chaudhary, Doongar R.
author_sort Desai, Nisheeth C.
collection PubMed
description [Image: see text] Multidrug-resistant fungal infections have become much more common in recent years, especially in immune-compromised patients. Therefore, researchers and pharmaceutical professionals have focused on the development of novel antifungal agents that can tackle the problem of resistance. In continuation to this, a novel series of pyrazole-bearing pyrido[2,3-d]pyrimidine-2,4(1H,3H)-dione derivatives (4a–4o) have been developed. These compounds have been screened against Candida albicans, Aspergillus niger, and Aspergillus clavatus. The synthesized compounds were characterized by well-known spectroscopic techniques, i.e., IR, (1)H NMR, (13)C NMR, and mass spectrometry. In vitro antifungal results revealed that compound 4n showed activity against C. albicans having MIC value of 200 μg/mL. To know the plausible mode of action, the active derivatives were screened for anti-biofilm and ergosterol biosynthesis inhibition activities. The compounds 4h, 4j, 4k, and 4n showed greater ergosterol biosynthesis inhibition than the control DMSO. To comprehend how molecules interact with the receptor, studies of molecular docking of 4k and 4n have been performed on the homology-modeled protein of β-tubulin. The molecular docking revealed that the active compounds 4h, 4j, 4k, 4l, and 4n interacting with the active site amino acid of sterol 14-alpha demethylase (PDB ID: 5v5z) indicate one of the possible modes of action of ergosterol inhibition activity. The synthesized compounds 4c, 4e, 4h, 4i, 4j, 4k, 4l, and 4n inhibited biofilm formation and possessed the potential for anti-biofilm activity. DFT-based quantum mechanical calculations were carried out to optimize, predict, and compare the vibration modes of the molecule 4a.
format Online
Article
Text
id pubmed-10586022
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher American Chemical Society
record_format MEDLINE/PubMed
spelling pubmed-105860222023-10-20 Synthesis, Antifungal Ergosterol Inhibition, Antibiofilm Activities, and Molecular Docking on β-Tubulin and Sterol 14-Alpha Demethylase along with DFT-Based Quantum Mechanical Calculation of Pyrazole Containing Fused Pyridine–Pyrimidine Derivatives Desai, Nisheeth C. Khasiya, Ashvinkumar G. Jadeja, Dharmpalsinh J. Monapara, Jahnvi D. Jethawa, Aratiba M. Dave, Bharti P. Sivan, Sree Kanth Manga, Vijjulatha Mhaske, Pravin C. Chaudhary, Doongar R. ACS Omega [Image: see text] Multidrug-resistant fungal infections have become much more common in recent years, especially in immune-compromised patients. Therefore, researchers and pharmaceutical professionals have focused on the development of novel antifungal agents that can tackle the problem of resistance. In continuation to this, a novel series of pyrazole-bearing pyrido[2,3-d]pyrimidine-2,4(1H,3H)-dione derivatives (4a–4o) have been developed. These compounds have been screened against Candida albicans, Aspergillus niger, and Aspergillus clavatus. The synthesized compounds were characterized by well-known spectroscopic techniques, i.e., IR, (1)H NMR, (13)C NMR, and mass spectrometry. In vitro antifungal results revealed that compound 4n showed activity against C. albicans having MIC value of 200 μg/mL. To know the plausible mode of action, the active derivatives were screened for anti-biofilm and ergosterol biosynthesis inhibition activities. The compounds 4h, 4j, 4k, and 4n showed greater ergosterol biosynthesis inhibition than the control DMSO. To comprehend how molecules interact with the receptor, studies of molecular docking of 4k and 4n have been performed on the homology-modeled protein of β-tubulin. The molecular docking revealed that the active compounds 4h, 4j, 4k, 4l, and 4n interacting with the active site amino acid of sterol 14-alpha demethylase (PDB ID: 5v5z) indicate one of the possible modes of action of ergosterol inhibition activity. The synthesized compounds 4c, 4e, 4h, 4i, 4j, 4k, 4l, and 4n inhibited biofilm formation and possessed the potential for anti-biofilm activity. DFT-based quantum mechanical calculations were carried out to optimize, predict, and compare the vibration modes of the molecule 4a. American Chemical Society 2023-10-06 /pmc/articles/PMC10586022/ /pubmed/37867649 http://dx.doi.org/10.1021/acsomega.3c01722 Text en © 2023 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by-nc-nd/4.0/Permits non-commercial access and re-use, provided that author attribution and integrity are maintained; but does not permit creation of adaptations or other derivative works (https://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Desai, Nisheeth C.
Khasiya, Ashvinkumar G.
Jadeja, Dharmpalsinh J.
Monapara, Jahnvi D.
Jethawa, Aratiba M.
Dave, Bharti P.
Sivan, Sree Kanth
Manga, Vijjulatha
Mhaske, Pravin C.
Chaudhary, Doongar R.
Synthesis, Antifungal Ergosterol Inhibition, Antibiofilm Activities, and Molecular Docking on β-Tubulin and Sterol 14-Alpha Demethylase along with DFT-Based Quantum Mechanical Calculation of Pyrazole Containing Fused Pyridine–Pyrimidine Derivatives
title Synthesis, Antifungal Ergosterol Inhibition, Antibiofilm Activities, and Molecular Docking on β-Tubulin and Sterol 14-Alpha Demethylase along with DFT-Based Quantum Mechanical Calculation of Pyrazole Containing Fused Pyridine–Pyrimidine Derivatives
title_full Synthesis, Antifungal Ergosterol Inhibition, Antibiofilm Activities, and Molecular Docking on β-Tubulin and Sterol 14-Alpha Demethylase along with DFT-Based Quantum Mechanical Calculation of Pyrazole Containing Fused Pyridine–Pyrimidine Derivatives
title_fullStr Synthesis, Antifungal Ergosterol Inhibition, Antibiofilm Activities, and Molecular Docking on β-Tubulin and Sterol 14-Alpha Demethylase along with DFT-Based Quantum Mechanical Calculation of Pyrazole Containing Fused Pyridine–Pyrimidine Derivatives
title_full_unstemmed Synthesis, Antifungal Ergosterol Inhibition, Antibiofilm Activities, and Molecular Docking on β-Tubulin and Sterol 14-Alpha Demethylase along with DFT-Based Quantum Mechanical Calculation of Pyrazole Containing Fused Pyridine–Pyrimidine Derivatives
title_short Synthesis, Antifungal Ergosterol Inhibition, Antibiofilm Activities, and Molecular Docking on β-Tubulin and Sterol 14-Alpha Demethylase along with DFT-Based Quantum Mechanical Calculation of Pyrazole Containing Fused Pyridine–Pyrimidine Derivatives
title_sort synthesis, antifungal ergosterol inhibition, antibiofilm activities, and molecular docking on β-tubulin and sterol 14-alpha demethylase along with dft-based quantum mechanical calculation of pyrazole containing fused pyridine–pyrimidine derivatives
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10586022/
https://www.ncbi.nlm.nih.gov/pubmed/37867649
http://dx.doi.org/10.1021/acsomega.3c01722
work_keys_str_mv AT desainisheethc synthesisantifungalergosterolinhibitionantibiofilmactivitiesandmoleculardockingonbtubulinandsterol14alphademethylasealongwithdftbasedquantummechanicalcalculationofpyrazolecontainingfusedpyridinepyrimidinederivatives
AT khasiyaashvinkumarg synthesisantifungalergosterolinhibitionantibiofilmactivitiesandmoleculardockingonbtubulinandsterol14alphademethylasealongwithdftbasedquantummechanicalcalculationofpyrazolecontainingfusedpyridinepyrimidinederivatives
AT jadejadharmpalsinhj synthesisantifungalergosterolinhibitionantibiofilmactivitiesandmoleculardockingonbtubulinandsterol14alphademethylasealongwithdftbasedquantummechanicalcalculationofpyrazolecontainingfusedpyridinepyrimidinederivatives
AT monaparajahnvid synthesisantifungalergosterolinhibitionantibiofilmactivitiesandmoleculardockingonbtubulinandsterol14alphademethylasealongwithdftbasedquantummechanicalcalculationofpyrazolecontainingfusedpyridinepyrimidinederivatives
AT jethawaaratibam synthesisantifungalergosterolinhibitionantibiofilmactivitiesandmoleculardockingonbtubulinandsterol14alphademethylasealongwithdftbasedquantummechanicalcalculationofpyrazolecontainingfusedpyridinepyrimidinederivatives
AT davebhartip synthesisantifungalergosterolinhibitionantibiofilmactivitiesandmoleculardockingonbtubulinandsterol14alphademethylasealongwithdftbasedquantummechanicalcalculationofpyrazolecontainingfusedpyridinepyrimidinederivatives
AT sivansreekanth synthesisantifungalergosterolinhibitionantibiofilmactivitiesandmoleculardockingonbtubulinandsterol14alphademethylasealongwithdftbasedquantummechanicalcalculationofpyrazolecontainingfusedpyridinepyrimidinederivatives
AT mangavijjulatha synthesisantifungalergosterolinhibitionantibiofilmactivitiesandmoleculardockingonbtubulinandsterol14alphademethylasealongwithdftbasedquantummechanicalcalculationofpyrazolecontainingfusedpyridinepyrimidinederivatives
AT mhaskepravinc synthesisantifungalergosterolinhibitionantibiofilmactivitiesandmoleculardockingonbtubulinandsterol14alphademethylasealongwithdftbasedquantummechanicalcalculationofpyrazolecontainingfusedpyridinepyrimidinederivatives
AT chaudharydoongarr synthesisantifungalergosterolinhibitionantibiofilmactivitiesandmoleculardockingonbtubulinandsterol14alphademethylasealongwithdftbasedquantummechanicalcalculationofpyrazolecontainingfusedpyridinepyrimidinederivatives