Coding-complete genomes of XBB.1.16, XBB.2.3, FL.4 (alias of XBB.1.9.1.4), and XBB.3 of SARS-CoV-2 Omicron isolated from Bangladesh

We announce the coding-complete genomes of four different strains of SARS-CoV-2 Omicron lineages, XBB.1.16, XBB.2.3, FL.4 (alias of XBB.1.9.1.4), and XBB.3. These strains were obtained between October 2022 and May 2023 from nasopharyngeal swabs of four Bangladeshi individuals, while one of them had...

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Autores principales: Rahman, Saikt, Habib, Mohammad Tanbir, Afrad, Mokibul Hassan, Hasan, Mahin, Tahsin, Anika, Jubair, Mohammad, Khan, Manjur Hossain, Alam, Ahmed Nawsher, Chowdhury, Emran Kabir, Rahman, Mustafizur, Ryan, Edward Thomas, Shirin, Tahmina, Qadri, Firdausi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2023
Materias:
Genome Sequences
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10586141/
https://www.ncbi.nlm.nih.gov/pubmed/37668364
http://dx.doi.org/10.1128/MRA.00562-23
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author Rahman, Saikt
Habib, Mohammad Tanbir
Afrad, Mokibul Hassan
Hasan, Mahin
Tahsin, Anika
Jubair, Mohammad
Khan, Manjur Hossain
Alam, Ahmed Nawsher
Chowdhury, Emran Kabir
Rahman, Mustafizur
Ryan, Edward Thomas
Shirin, Tahmina
Qadri, Firdausi
author_facet Rahman, Saikt
Habib, Mohammad Tanbir
Afrad, Mokibul Hassan
Hasan, Mahin
Tahsin, Anika
Jubair, Mohammad
Khan, Manjur Hossain
Alam, Ahmed Nawsher
Chowdhury, Emran Kabir
Rahman, Mustafizur
Ryan, Edward Thomas
Shirin, Tahmina
Qadri, Firdausi
author_sort Rahman, Saikt
collection PubMed
description We announce the coding-complete genomes of four different strains of SARS-CoV-2 Omicron lineages, XBB.1.16, XBB.2.3, FL.4 (alias of XBB.1.9.1.4), and XBB.3. These strains were obtained between October 2022 and May 2023 from nasopharyngeal swabs of four Bangladeshi individuals, while one of them had a travel history. Genomic data were produced by implementing ARTIC Network-based amplicon sequencing using the Oxford Nanopore Technology.
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spelling pubmed-105861412023-10-20 Coding-complete genomes of XBB.1.16, XBB.2.3, FL.4 (alias of XBB.1.9.1.4), and XBB.3 of SARS-CoV-2 Omicron isolated from Bangladesh Rahman, Saikt Habib, Mohammad Tanbir Afrad, Mokibul Hassan Hasan, Mahin Tahsin, Anika Jubair, Mohammad Khan, Manjur Hossain Alam, Ahmed Nawsher Chowdhury, Emran Kabir Rahman, Mustafizur Ryan, Edward Thomas Shirin, Tahmina Qadri, Firdausi Microbiol Resour Announc Genome Sequences We announce the coding-complete genomes of four different strains of SARS-CoV-2 Omicron lineages, XBB.1.16, XBB.2.3, FL.4 (alias of XBB.1.9.1.4), and XBB.3. These strains were obtained between October 2022 and May 2023 from nasopharyngeal swabs of four Bangladeshi individuals, while one of them had a travel history. Genomic data were produced by implementing ARTIC Network-based amplicon sequencing using the Oxford Nanopore Technology. American Society for Microbiology 2023-09-05 /pmc/articles/PMC10586141/ /pubmed/37668364 http://dx.doi.org/10.1128/MRA.00562-23 Text en Copyright © 2023 Rahman et al. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Genome Sequences
Rahman, Saikt
Habib, Mohammad Tanbir
Afrad, Mokibul Hassan
Hasan, Mahin
Tahsin, Anika
Jubair, Mohammad
Khan, Manjur Hossain
Alam, Ahmed Nawsher
Chowdhury, Emran Kabir
Rahman, Mustafizur
Ryan, Edward Thomas
Shirin, Tahmina
Qadri, Firdausi
Coding-complete genomes of XBB.1.16, XBB.2.3, FL.4 (alias of XBB.1.9.1.4), and XBB.3 of SARS-CoV-2 Omicron isolated from Bangladesh
title Coding-complete genomes of XBB.1.16, XBB.2.3, FL.4 (alias of XBB.1.9.1.4), and XBB.3 of SARS-CoV-2 Omicron isolated from Bangladesh
title_full Coding-complete genomes of XBB.1.16, XBB.2.3, FL.4 (alias of XBB.1.9.1.4), and XBB.3 of SARS-CoV-2 Omicron isolated from Bangladesh
title_fullStr Coding-complete genomes of XBB.1.16, XBB.2.3, FL.4 (alias of XBB.1.9.1.4), and XBB.3 of SARS-CoV-2 Omicron isolated from Bangladesh
title_full_unstemmed Coding-complete genomes of XBB.1.16, XBB.2.3, FL.4 (alias of XBB.1.9.1.4), and XBB.3 of SARS-CoV-2 Omicron isolated from Bangladesh
title_short Coding-complete genomes of XBB.1.16, XBB.2.3, FL.4 (alias of XBB.1.9.1.4), and XBB.3 of SARS-CoV-2 Omicron isolated from Bangladesh
title_sort coding-complete genomes of xbb.1.16, xbb.2.3, fl.4 (alias of xbb.1.9.1.4), and xbb.3 of sars-cov-2 omicron isolated from bangladesh
topic Genome Sequences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10586141/
https://www.ncbi.nlm.nih.gov/pubmed/37668364
http://dx.doi.org/10.1128/MRA.00562-23
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