Cargando…

A high-throughput structural system biology approach to increase structure representation of proteins from Clostridioides difficile

Clostridioides difficile causes life-threatening gastrointestinal infections. It is a high-risk pathogen due to a lack of effective treatments, antimicrobial resistance, and a poorly conserved genomic core. Herein, we report 30 X-ray structures from a structure genomics pipeline spanning 13 years, r...

Descripción completa

Detalles Bibliográficos
Autores principales: Rosas-Lemus, Monica, Dey, Supratim, Minasov, George, Tan, Kemin, Anderson, Spencer M., Brunzelle, Joseph, Nocadello, Salvatore, Shabalin, Ivan, Filippova, Ekaterina, Halavaty, Andrei, Kim, Youngchang, Maltseva, Natalia, Osipiuk, Jerzy, Minor, Wladek, Joachimiak, Andrzej, Savchenko, Alexei, Anderson, Wayne F., Satchell, Karla J. F.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10586155/
https://www.ncbi.nlm.nih.gov/pubmed/37747257
http://dx.doi.org/10.1128/MRA.00507-23
_version_ 1785123098095255552
author Rosas-Lemus, Monica
Dey, Supratim
Minasov, George
Tan, Kemin
Anderson, Spencer M.
Brunzelle, Joseph
Nocadello, Salvatore
Shabalin, Ivan
Filippova, Ekaterina
Halavaty, Andrei
Kim, Youngchang
Maltseva, Natalia
Osipiuk, Jerzy
Minor, Wladek
Joachimiak, Andrzej
Savchenko, Alexei
Anderson, Wayne F.
Satchell, Karla J. F.
author_facet Rosas-Lemus, Monica
Dey, Supratim
Minasov, George
Tan, Kemin
Anderson, Spencer M.
Brunzelle, Joseph
Nocadello, Salvatore
Shabalin, Ivan
Filippova, Ekaterina
Halavaty, Andrei
Kim, Youngchang
Maltseva, Natalia
Osipiuk, Jerzy
Minor, Wladek
Joachimiak, Andrzej
Savchenko, Alexei
Anderson, Wayne F.
Satchell, Karla J. F.
author_sort Rosas-Lemus, Monica
collection PubMed
description Clostridioides difficile causes life-threatening gastrointestinal infections. It is a high-risk pathogen due to a lack of effective treatments, antimicrobial resistance, and a poorly conserved genomic core. Herein, we report 30 X-ray structures from a structure genomics pipeline spanning 13 years, representing 10.2% of the X-ray structures for this important pathogen.
format Online
Article
Text
id pubmed-10586155
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher American Society for Microbiology
record_format MEDLINE/PubMed
spelling pubmed-105861552023-10-20 A high-throughput structural system biology approach to increase structure representation of proteins from Clostridioides difficile Rosas-Lemus, Monica Dey, Supratim Minasov, George Tan, Kemin Anderson, Spencer M. Brunzelle, Joseph Nocadello, Salvatore Shabalin, Ivan Filippova, Ekaterina Halavaty, Andrei Kim, Youngchang Maltseva, Natalia Osipiuk, Jerzy Minor, Wladek Joachimiak, Andrzej Savchenko, Alexei Anderson, Wayne F. Satchell, Karla J. F. Microbiol Resour Announc Other Genetic Resources Clostridioides difficile causes life-threatening gastrointestinal infections. It is a high-risk pathogen due to a lack of effective treatments, antimicrobial resistance, and a poorly conserved genomic core. Herein, we report 30 X-ray structures from a structure genomics pipeline spanning 13 years, representing 10.2% of the X-ray structures for this important pathogen. American Society for Microbiology 2023-09-25 /pmc/articles/PMC10586155/ /pubmed/37747257 http://dx.doi.org/10.1128/MRA.00507-23 Text en Copyright © 2023 Rosas-Lemus et al. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Other Genetic Resources
Rosas-Lemus, Monica
Dey, Supratim
Minasov, George
Tan, Kemin
Anderson, Spencer M.
Brunzelle, Joseph
Nocadello, Salvatore
Shabalin, Ivan
Filippova, Ekaterina
Halavaty, Andrei
Kim, Youngchang
Maltseva, Natalia
Osipiuk, Jerzy
Minor, Wladek
Joachimiak, Andrzej
Savchenko, Alexei
Anderson, Wayne F.
Satchell, Karla J. F.
A high-throughput structural system biology approach to increase structure representation of proteins from Clostridioides difficile
title A high-throughput structural system biology approach to increase structure representation of proteins from Clostridioides difficile
title_full A high-throughput structural system biology approach to increase structure representation of proteins from Clostridioides difficile
title_fullStr A high-throughput structural system biology approach to increase structure representation of proteins from Clostridioides difficile
title_full_unstemmed A high-throughput structural system biology approach to increase structure representation of proteins from Clostridioides difficile
title_short A high-throughput structural system biology approach to increase structure representation of proteins from Clostridioides difficile
title_sort high-throughput structural system biology approach to increase structure representation of proteins from clostridioides difficile
topic Other Genetic Resources
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10586155/
https://www.ncbi.nlm.nih.gov/pubmed/37747257
http://dx.doi.org/10.1128/MRA.00507-23
work_keys_str_mv AT rosaslemusmonica ahighthroughputstructuralsystembiologyapproachtoincreasestructurerepresentationofproteinsfromclostridioidesdifficile
AT deysupratim ahighthroughputstructuralsystembiologyapproachtoincreasestructurerepresentationofproteinsfromclostridioidesdifficile
AT minasovgeorge ahighthroughputstructuralsystembiologyapproachtoincreasestructurerepresentationofproteinsfromclostridioidesdifficile
AT tankemin ahighthroughputstructuralsystembiologyapproachtoincreasestructurerepresentationofproteinsfromclostridioidesdifficile
AT andersonspencerm ahighthroughputstructuralsystembiologyapproachtoincreasestructurerepresentationofproteinsfromclostridioidesdifficile
AT brunzellejoseph ahighthroughputstructuralsystembiologyapproachtoincreasestructurerepresentationofproteinsfromclostridioidesdifficile
AT nocadellosalvatore ahighthroughputstructuralsystembiologyapproachtoincreasestructurerepresentationofproteinsfromclostridioidesdifficile
AT shabalinivan ahighthroughputstructuralsystembiologyapproachtoincreasestructurerepresentationofproteinsfromclostridioidesdifficile
AT filippovaekaterina ahighthroughputstructuralsystembiologyapproachtoincreasestructurerepresentationofproteinsfromclostridioidesdifficile
AT halavatyandrei ahighthroughputstructuralsystembiologyapproachtoincreasestructurerepresentationofproteinsfromclostridioidesdifficile
AT kimyoungchang ahighthroughputstructuralsystembiologyapproachtoincreasestructurerepresentationofproteinsfromclostridioidesdifficile
AT maltsevanatalia ahighthroughputstructuralsystembiologyapproachtoincreasestructurerepresentationofproteinsfromclostridioidesdifficile
AT osipiukjerzy ahighthroughputstructuralsystembiologyapproachtoincreasestructurerepresentationofproteinsfromclostridioidesdifficile
AT minorwladek ahighthroughputstructuralsystembiologyapproachtoincreasestructurerepresentationofproteinsfromclostridioidesdifficile
AT joachimiakandrzej ahighthroughputstructuralsystembiologyapproachtoincreasestructurerepresentationofproteinsfromclostridioidesdifficile
AT savchenkoalexei ahighthroughputstructuralsystembiologyapproachtoincreasestructurerepresentationofproteinsfromclostridioidesdifficile
AT andersonwaynef ahighthroughputstructuralsystembiologyapproachtoincreasestructurerepresentationofproteinsfromclostridioidesdifficile
AT satchellkarlajf ahighthroughputstructuralsystembiologyapproachtoincreasestructurerepresentationofproteinsfromclostridioidesdifficile
AT ahighthroughputstructuralsystembiologyapproachtoincreasestructurerepresentationofproteinsfromclostridioidesdifficile
AT rosaslemusmonica highthroughputstructuralsystembiologyapproachtoincreasestructurerepresentationofproteinsfromclostridioidesdifficile
AT deysupratim highthroughputstructuralsystembiologyapproachtoincreasestructurerepresentationofproteinsfromclostridioidesdifficile
AT minasovgeorge highthroughputstructuralsystembiologyapproachtoincreasestructurerepresentationofproteinsfromclostridioidesdifficile
AT tankemin highthroughputstructuralsystembiologyapproachtoincreasestructurerepresentationofproteinsfromclostridioidesdifficile
AT andersonspencerm highthroughputstructuralsystembiologyapproachtoincreasestructurerepresentationofproteinsfromclostridioidesdifficile
AT brunzellejoseph highthroughputstructuralsystembiologyapproachtoincreasestructurerepresentationofproteinsfromclostridioidesdifficile
AT nocadellosalvatore highthroughputstructuralsystembiologyapproachtoincreasestructurerepresentationofproteinsfromclostridioidesdifficile
AT shabalinivan highthroughputstructuralsystembiologyapproachtoincreasestructurerepresentationofproteinsfromclostridioidesdifficile
AT filippovaekaterina highthroughputstructuralsystembiologyapproachtoincreasestructurerepresentationofproteinsfromclostridioidesdifficile
AT halavatyandrei highthroughputstructuralsystembiologyapproachtoincreasestructurerepresentationofproteinsfromclostridioidesdifficile
AT kimyoungchang highthroughputstructuralsystembiologyapproachtoincreasestructurerepresentationofproteinsfromclostridioidesdifficile
AT maltsevanatalia highthroughputstructuralsystembiologyapproachtoincreasestructurerepresentationofproteinsfromclostridioidesdifficile
AT osipiukjerzy highthroughputstructuralsystembiologyapproachtoincreasestructurerepresentationofproteinsfromclostridioidesdifficile
AT minorwladek highthroughputstructuralsystembiologyapproachtoincreasestructurerepresentationofproteinsfromclostridioidesdifficile
AT joachimiakandrzej highthroughputstructuralsystembiologyapproachtoincreasestructurerepresentationofproteinsfromclostridioidesdifficile
AT savchenkoalexei highthroughputstructuralsystembiologyapproachtoincreasestructurerepresentationofproteinsfromclostridioidesdifficile
AT andersonwaynef highthroughputstructuralsystembiologyapproachtoincreasestructurerepresentationofproteinsfromclostridioidesdifficile
AT satchellkarlajf highthroughputstructuralsystembiologyapproachtoincreasestructurerepresentationofproteinsfromclostridioidesdifficile
AT highthroughputstructuralsystembiologyapproachtoincreasestructurerepresentationofproteinsfromclostridioidesdifficile