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Robotized indoor phenotyping allows genomic prediction of adaptive traits in the field
Breeding for resilience to climate change requires considering adaptive traits such as plant architecture, stomatal conductance and growth, beyond the current selection for yield. Robotized indoor phenotyping allows measuring such traits at high throughput for speed breeding, but is often considered...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10587076/ https://www.ncbi.nlm.nih.gov/pubmed/37857601 http://dx.doi.org/10.1038/s41467-023-42298-z |
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author | Bouidghaghen, Jugurta Moreau, Laurence Beauchêne, Katia Chapuis, Romain Mangel, Nathalie Cabrera‐Bosquet, Llorenç Welcker, Claude Bogard, Matthieu Tardieu, François |
author_facet | Bouidghaghen, Jugurta Moreau, Laurence Beauchêne, Katia Chapuis, Romain Mangel, Nathalie Cabrera‐Bosquet, Llorenç Welcker, Claude Bogard, Matthieu Tardieu, François |
author_sort | Bouidghaghen, Jugurta |
collection | PubMed |
description | Breeding for resilience to climate change requires considering adaptive traits such as plant architecture, stomatal conductance and growth, beyond the current selection for yield. Robotized indoor phenotyping allows measuring such traits at high throughput for speed breeding, but is often considered as non-relevant for field conditions. Here, we show that maize adaptive traits can be inferred in different fields, based on genotypic values obtained indoor and on environmental conditions in each considered field. The modelling of environmental effects allows translation from indoor to fields, but also from one field to another field. Furthermore, genotypic values of considered traits match between indoor and field conditions. Genomic prediction results in adequate ranking of genotypes for the tested traits, although with lesser precision for elite varieties presenting reduced phenotypic variability. Hence, it distinguishes genotypes with high or low values for adaptive traits, conferring either spender or conservative strategies for water use under future climates. |
format | Online Article Text |
id | pubmed-10587076 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-105870762023-10-21 Robotized indoor phenotyping allows genomic prediction of adaptive traits in the field Bouidghaghen, Jugurta Moreau, Laurence Beauchêne, Katia Chapuis, Romain Mangel, Nathalie Cabrera‐Bosquet, Llorenç Welcker, Claude Bogard, Matthieu Tardieu, François Nat Commun Article Breeding for resilience to climate change requires considering adaptive traits such as plant architecture, stomatal conductance and growth, beyond the current selection for yield. Robotized indoor phenotyping allows measuring such traits at high throughput for speed breeding, but is often considered as non-relevant for field conditions. Here, we show that maize adaptive traits can be inferred in different fields, based on genotypic values obtained indoor and on environmental conditions in each considered field. The modelling of environmental effects allows translation from indoor to fields, but also from one field to another field. Furthermore, genotypic values of considered traits match between indoor and field conditions. Genomic prediction results in adequate ranking of genotypes for the tested traits, although with lesser precision for elite varieties presenting reduced phenotypic variability. Hence, it distinguishes genotypes with high or low values for adaptive traits, conferring either spender or conservative strategies for water use under future climates. Nature Publishing Group UK 2023-10-19 /pmc/articles/PMC10587076/ /pubmed/37857601 http://dx.doi.org/10.1038/s41467-023-42298-z Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Bouidghaghen, Jugurta Moreau, Laurence Beauchêne, Katia Chapuis, Romain Mangel, Nathalie Cabrera‐Bosquet, Llorenç Welcker, Claude Bogard, Matthieu Tardieu, François Robotized indoor phenotyping allows genomic prediction of adaptive traits in the field |
title | Robotized indoor phenotyping allows genomic prediction of adaptive traits in the field |
title_full | Robotized indoor phenotyping allows genomic prediction of adaptive traits in the field |
title_fullStr | Robotized indoor phenotyping allows genomic prediction of adaptive traits in the field |
title_full_unstemmed | Robotized indoor phenotyping allows genomic prediction of adaptive traits in the field |
title_short | Robotized indoor phenotyping allows genomic prediction of adaptive traits in the field |
title_sort | robotized indoor phenotyping allows genomic prediction of adaptive traits in the field |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10587076/ https://www.ncbi.nlm.nih.gov/pubmed/37857601 http://dx.doi.org/10.1038/s41467-023-42298-z |
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