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A large pedigree study confirmed the CGG repeat expansion of RILPL1 Is associated with oculopharyngodistal myopathy
BACKGROUND: Oculopharyngodistal myopathy (OPDM) is an autosomal dominant adult-onset degenerative muscle disorder characterized by ptosis, ophthalmoplegia and weakness of the facial, pharyngeal and limb muscles. Trinucleotide repeat expansions in non-coding regions of LRP12, G1PC1, NOTCH2NLC and RIL...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10590002/ https://www.ncbi.nlm.nih.gov/pubmed/37864208 http://dx.doi.org/10.1186/s12920-023-01586-9 |
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author | Yang, Xinzhuang Zhang, Dingding Shen, Si Li, Pidong Li, Mengjie Niu, Jingwen Ma, Dongrui Xu, Dan Li, Shuangjie Guo, Xueyu Wang, Zhen Zhao, Yanhuan Ren, Haitao Ling, Chao Wang, Yang Fan, Yu Shen, Jianxiong Zhu, Yicheng Wang, Depeng Cui, Liying Chen, Lin Shi, Changhe Dai, Yi |
author_facet | Yang, Xinzhuang Zhang, Dingding Shen, Si Li, Pidong Li, Mengjie Niu, Jingwen Ma, Dongrui Xu, Dan Li, Shuangjie Guo, Xueyu Wang, Zhen Zhao, Yanhuan Ren, Haitao Ling, Chao Wang, Yang Fan, Yu Shen, Jianxiong Zhu, Yicheng Wang, Depeng Cui, Liying Chen, Lin Shi, Changhe Dai, Yi |
author_sort | Yang, Xinzhuang |
collection | PubMed |
description | BACKGROUND: Oculopharyngodistal myopathy (OPDM) is an autosomal dominant adult-onset degenerative muscle disorder characterized by ptosis, ophthalmoplegia and weakness of the facial, pharyngeal and limb muscles. Trinucleotide repeat expansions in non-coding regions of LRP12, G1PC1, NOTCH2NLC and RILPL1 were reported to be the etiologies for OPDM. RESULTS: In this study, we performed long-read whole-genome sequencing in a large five-generation family of 156 individuals, including 21 patients diagnosed with typical OPDM. We identified CGG repeat expansions in 5’UTR of RILPL1 gene in all patients we tested while no CGG expansion in unaffected family members. Repeat-primed PCR and fluorescence amplicon length analysis PCR were further confirmed the segregation of CGG expansions in other family members and 1000 normal Chinese controls. Methylation analysis indicated that methylation levels of the RILPL1 gene were unaltered in OPDM patients, which was consistent with previous studies. Our findings provide evidence that RILPL1 is associated OPDM in this large pedigree. CONCLUSIONS: Our results identified RILPL1 is the associated the disease in this large pedigree. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12920-023-01586-9. |
format | Online Article Text |
id | pubmed-10590002 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-105900022023-10-22 A large pedigree study confirmed the CGG repeat expansion of RILPL1 Is associated with oculopharyngodistal myopathy Yang, Xinzhuang Zhang, Dingding Shen, Si Li, Pidong Li, Mengjie Niu, Jingwen Ma, Dongrui Xu, Dan Li, Shuangjie Guo, Xueyu Wang, Zhen Zhao, Yanhuan Ren, Haitao Ling, Chao Wang, Yang Fan, Yu Shen, Jianxiong Zhu, Yicheng Wang, Depeng Cui, Liying Chen, Lin Shi, Changhe Dai, Yi BMC Med Genomics Research BACKGROUND: Oculopharyngodistal myopathy (OPDM) is an autosomal dominant adult-onset degenerative muscle disorder characterized by ptosis, ophthalmoplegia and weakness of the facial, pharyngeal and limb muscles. Trinucleotide repeat expansions in non-coding regions of LRP12, G1PC1, NOTCH2NLC and RILPL1 were reported to be the etiologies for OPDM. RESULTS: In this study, we performed long-read whole-genome sequencing in a large five-generation family of 156 individuals, including 21 patients diagnosed with typical OPDM. We identified CGG repeat expansions in 5’UTR of RILPL1 gene in all patients we tested while no CGG expansion in unaffected family members. Repeat-primed PCR and fluorescence amplicon length analysis PCR were further confirmed the segregation of CGG expansions in other family members and 1000 normal Chinese controls. Methylation analysis indicated that methylation levels of the RILPL1 gene were unaltered in OPDM patients, which was consistent with previous studies. Our findings provide evidence that RILPL1 is associated OPDM in this large pedigree. CONCLUSIONS: Our results identified RILPL1 is the associated the disease in this large pedigree. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12920-023-01586-9. BioMed Central 2023-10-20 /pmc/articles/PMC10590002/ /pubmed/37864208 http://dx.doi.org/10.1186/s12920-023-01586-9 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Yang, Xinzhuang Zhang, Dingding Shen, Si Li, Pidong Li, Mengjie Niu, Jingwen Ma, Dongrui Xu, Dan Li, Shuangjie Guo, Xueyu Wang, Zhen Zhao, Yanhuan Ren, Haitao Ling, Chao Wang, Yang Fan, Yu Shen, Jianxiong Zhu, Yicheng Wang, Depeng Cui, Liying Chen, Lin Shi, Changhe Dai, Yi A large pedigree study confirmed the CGG repeat expansion of RILPL1 Is associated with oculopharyngodistal myopathy |
title | A large pedigree study confirmed the CGG repeat expansion of RILPL1 Is associated with oculopharyngodistal myopathy |
title_full | A large pedigree study confirmed the CGG repeat expansion of RILPL1 Is associated with oculopharyngodistal myopathy |
title_fullStr | A large pedigree study confirmed the CGG repeat expansion of RILPL1 Is associated with oculopharyngodistal myopathy |
title_full_unstemmed | A large pedigree study confirmed the CGG repeat expansion of RILPL1 Is associated with oculopharyngodistal myopathy |
title_short | A large pedigree study confirmed the CGG repeat expansion of RILPL1 Is associated with oculopharyngodistal myopathy |
title_sort | large pedigree study confirmed the cgg repeat expansion of rilpl1 is associated with oculopharyngodistal myopathy |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10590002/ https://www.ncbi.nlm.nih.gov/pubmed/37864208 http://dx.doi.org/10.1186/s12920-023-01586-9 |
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