Cargando…

A large pedigree study confirmed the CGG repeat expansion of RILPL1 Is associated with oculopharyngodistal myopathy

BACKGROUND: Oculopharyngodistal myopathy (OPDM) is an autosomal dominant adult-onset degenerative muscle disorder characterized by ptosis, ophthalmoplegia and weakness of the facial, pharyngeal and limb muscles. Trinucleotide repeat expansions in non-coding regions of LRP12, G1PC1, NOTCH2NLC and RIL...

Descripción completa

Detalles Bibliográficos
Autores principales: Yang, Xinzhuang, Zhang, Dingding, Shen, Si, Li, Pidong, Li, Mengjie, Niu, Jingwen, Ma, Dongrui, Xu, Dan, Li, Shuangjie, Guo, Xueyu, Wang, Zhen, Zhao, Yanhuan, Ren, Haitao, Ling, Chao, Wang, Yang, Fan, Yu, Shen, Jianxiong, Zhu, Yicheng, Wang, Depeng, Cui, Liying, Chen, Lin, Shi, Changhe, Dai, Yi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10590002/
https://www.ncbi.nlm.nih.gov/pubmed/37864208
http://dx.doi.org/10.1186/s12920-023-01586-9
_version_ 1785123906070249472
author Yang, Xinzhuang
Zhang, Dingding
Shen, Si
Li, Pidong
Li, Mengjie
Niu, Jingwen
Ma, Dongrui
Xu, Dan
Li, Shuangjie
Guo, Xueyu
Wang, Zhen
Zhao, Yanhuan
Ren, Haitao
Ling, Chao
Wang, Yang
Fan, Yu
Shen, Jianxiong
Zhu, Yicheng
Wang, Depeng
Cui, Liying
Chen, Lin
Shi, Changhe
Dai, Yi
author_facet Yang, Xinzhuang
Zhang, Dingding
Shen, Si
Li, Pidong
Li, Mengjie
Niu, Jingwen
Ma, Dongrui
Xu, Dan
Li, Shuangjie
Guo, Xueyu
Wang, Zhen
Zhao, Yanhuan
Ren, Haitao
Ling, Chao
Wang, Yang
Fan, Yu
Shen, Jianxiong
Zhu, Yicheng
Wang, Depeng
Cui, Liying
Chen, Lin
Shi, Changhe
Dai, Yi
author_sort Yang, Xinzhuang
collection PubMed
description BACKGROUND: Oculopharyngodistal myopathy (OPDM) is an autosomal dominant adult-onset degenerative muscle disorder characterized by ptosis, ophthalmoplegia and weakness of the facial, pharyngeal and limb muscles. Trinucleotide repeat expansions in non-coding regions of LRP12, G1PC1, NOTCH2NLC and RILPL1 were reported to be the etiologies for OPDM. RESULTS: In this study, we performed long-read whole-genome sequencing in a large five-generation family of 156 individuals, including 21 patients diagnosed with typical OPDM. We identified CGG repeat expansions in 5’UTR of RILPL1 gene in all patients we tested while no CGG expansion in unaffected family members. Repeat-primed PCR and fluorescence amplicon length analysis PCR were further confirmed the segregation of CGG expansions in other family members and 1000 normal Chinese controls. Methylation analysis indicated that methylation levels of the RILPL1 gene were unaltered in OPDM patients, which was consistent with previous studies. Our findings provide evidence that RILPL1 is associated OPDM in this large pedigree. CONCLUSIONS: Our results identified RILPL1 is the associated the disease in this large pedigree. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12920-023-01586-9.
format Online
Article
Text
id pubmed-10590002
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-105900022023-10-22 A large pedigree study confirmed the CGG repeat expansion of RILPL1 Is associated with oculopharyngodistal myopathy Yang, Xinzhuang Zhang, Dingding Shen, Si Li, Pidong Li, Mengjie Niu, Jingwen Ma, Dongrui Xu, Dan Li, Shuangjie Guo, Xueyu Wang, Zhen Zhao, Yanhuan Ren, Haitao Ling, Chao Wang, Yang Fan, Yu Shen, Jianxiong Zhu, Yicheng Wang, Depeng Cui, Liying Chen, Lin Shi, Changhe Dai, Yi BMC Med Genomics Research BACKGROUND: Oculopharyngodistal myopathy (OPDM) is an autosomal dominant adult-onset degenerative muscle disorder characterized by ptosis, ophthalmoplegia and weakness of the facial, pharyngeal and limb muscles. Trinucleotide repeat expansions in non-coding regions of LRP12, G1PC1, NOTCH2NLC and RILPL1 were reported to be the etiologies for OPDM. RESULTS: In this study, we performed long-read whole-genome sequencing in a large five-generation family of 156 individuals, including 21 patients diagnosed with typical OPDM. We identified CGG repeat expansions in 5’UTR of RILPL1 gene in all patients we tested while no CGG expansion in unaffected family members. Repeat-primed PCR and fluorescence amplicon length analysis PCR were further confirmed the segregation of CGG expansions in other family members and 1000 normal Chinese controls. Methylation analysis indicated that methylation levels of the RILPL1 gene were unaltered in OPDM patients, which was consistent with previous studies. Our findings provide evidence that RILPL1 is associated OPDM in this large pedigree. CONCLUSIONS: Our results identified RILPL1 is the associated the disease in this large pedigree. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12920-023-01586-9. BioMed Central 2023-10-20 /pmc/articles/PMC10590002/ /pubmed/37864208 http://dx.doi.org/10.1186/s12920-023-01586-9 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Yang, Xinzhuang
Zhang, Dingding
Shen, Si
Li, Pidong
Li, Mengjie
Niu, Jingwen
Ma, Dongrui
Xu, Dan
Li, Shuangjie
Guo, Xueyu
Wang, Zhen
Zhao, Yanhuan
Ren, Haitao
Ling, Chao
Wang, Yang
Fan, Yu
Shen, Jianxiong
Zhu, Yicheng
Wang, Depeng
Cui, Liying
Chen, Lin
Shi, Changhe
Dai, Yi
A large pedigree study confirmed the CGG repeat expansion of RILPL1 Is associated with oculopharyngodistal myopathy
title A large pedigree study confirmed the CGG repeat expansion of RILPL1 Is associated with oculopharyngodistal myopathy
title_full A large pedigree study confirmed the CGG repeat expansion of RILPL1 Is associated with oculopharyngodistal myopathy
title_fullStr A large pedigree study confirmed the CGG repeat expansion of RILPL1 Is associated with oculopharyngodistal myopathy
title_full_unstemmed A large pedigree study confirmed the CGG repeat expansion of RILPL1 Is associated with oculopharyngodistal myopathy
title_short A large pedigree study confirmed the CGG repeat expansion of RILPL1 Is associated with oculopharyngodistal myopathy
title_sort large pedigree study confirmed the cgg repeat expansion of rilpl1 is associated with oculopharyngodistal myopathy
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10590002/
https://www.ncbi.nlm.nih.gov/pubmed/37864208
http://dx.doi.org/10.1186/s12920-023-01586-9
work_keys_str_mv AT yangxinzhuang alargepedigreestudyconfirmedthecggrepeatexpansionofrilpl1isassociatedwithoculopharyngodistalmyopathy
AT zhangdingding alargepedigreestudyconfirmedthecggrepeatexpansionofrilpl1isassociatedwithoculopharyngodistalmyopathy
AT shensi alargepedigreestudyconfirmedthecggrepeatexpansionofrilpl1isassociatedwithoculopharyngodistalmyopathy
AT lipidong alargepedigreestudyconfirmedthecggrepeatexpansionofrilpl1isassociatedwithoculopharyngodistalmyopathy
AT limengjie alargepedigreestudyconfirmedthecggrepeatexpansionofrilpl1isassociatedwithoculopharyngodistalmyopathy
AT niujingwen alargepedigreestudyconfirmedthecggrepeatexpansionofrilpl1isassociatedwithoculopharyngodistalmyopathy
AT madongrui alargepedigreestudyconfirmedthecggrepeatexpansionofrilpl1isassociatedwithoculopharyngodistalmyopathy
AT xudan alargepedigreestudyconfirmedthecggrepeatexpansionofrilpl1isassociatedwithoculopharyngodistalmyopathy
AT lishuangjie alargepedigreestudyconfirmedthecggrepeatexpansionofrilpl1isassociatedwithoculopharyngodistalmyopathy
AT guoxueyu alargepedigreestudyconfirmedthecggrepeatexpansionofrilpl1isassociatedwithoculopharyngodistalmyopathy
AT wangzhen alargepedigreestudyconfirmedthecggrepeatexpansionofrilpl1isassociatedwithoculopharyngodistalmyopathy
AT zhaoyanhuan alargepedigreestudyconfirmedthecggrepeatexpansionofrilpl1isassociatedwithoculopharyngodistalmyopathy
AT renhaitao alargepedigreestudyconfirmedthecggrepeatexpansionofrilpl1isassociatedwithoculopharyngodistalmyopathy
AT lingchao alargepedigreestudyconfirmedthecggrepeatexpansionofrilpl1isassociatedwithoculopharyngodistalmyopathy
AT wangyang alargepedigreestudyconfirmedthecggrepeatexpansionofrilpl1isassociatedwithoculopharyngodistalmyopathy
AT fanyu alargepedigreestudyconfirmedthecggrepeatexpansionofrilpl1isassociatedwithoculopharyngodistalmyopathy
AT shenjianxiong alargepedigreestudyconfirmedthecggrepeatexpansionofrilpl1isassociatedwithoculopharyngodistalmyopathy
AT zhuyicheng alargepedigreestudyconfirmedthecggrepeatexpansionofrilpl1isassociatedwithoculopharyngodistalmyopathy
AT wangdepeng alargepedigreestudyconfirmedthecggrepeatexpansionofrilpl1isassociatedwithoculopharyngodistalmyopathy
AT cuiliying alargepedigreestudyconfirmedthecggrepeatexpansionofrilpl1isassociatedwithoculopharyngodistalmyopathy
AT chenlin alargepedigreestudyconfirmedthecggrepeatexpansionofrilpl1isassociatedwithoculopharyngodistalmyopathy
AT shichanghe alargepedigreestudyconfirmedthecggrepeatexpansionofrilpl1isassociatedwithoculopharyngodistalmyopathy
AT daiyi alargepedigreestudyconfirmedthecggrepeatexpansionofrilpl1isassociatedwithoculopharyngodistalmyopathy
AT yangxinzhuang largepedigreestudyconfirmedthecggrepeatexpansionofrilpl1isassociatedwithoculopharyngodistalmyopathy
AT zhangdingding largepedigreestudyconfirmedthecggrepeatexpansionofrilpl1isassociatedwithoculopharyngodistalmyopathy
AT shensi largepedigreestudyconfirmedthecggrepeatexpansionofrilpl1isassociatedwithoculopharyngodistalmyopathy
AT lipidong largepedigreestudyconfirmedthecggrepeatexpansionofrilpl1isassociatedwithoculopharyngodistalmyopathy
AT limengjie largepedigreestudyconfirmedthecggrepeatexpansionofrilpl1isassociatedwithoculopharyngodistalmyopathy
AT niujingwen largepedigreestudyconfirmedthecggrepeatexpansionofrilpl1isassociatedwithoculopharyngodistalmyopathy
AT madongrui largepedigreestudyconfirmedthecggrepeatexpansionofrilpl1isassociatedwithoculopharyngodistalmyopathy
AT xudan largepedigreestudyconfirmedthecggrepeatexpansionofrilpl1isassociatedwithoculopharyngodistalmyopathy
AT lishuangjie largepedigreestudyconfirmedthecggrepeatexpansionofrilpl1isassociatedwithoculopharyngodistalmyopathy
AT guoxueyu largepedigreestudyconfirmedthecggrepeatexpansionofrilpl1isassociatedwithoculopharyngodistalmyopathy
AT wangzhen largepedigreestudyconfirmedthecggrepeatexpansionofrilpl1isassociatedwithoculopharyngodistalmyopathy
AT zhaoyanhuan largepedigreestudyconfirmedthecggrepeatexpansionofrilpl1isassociatedwithoculopharyngodistalmyopathy
AT renhaitao largepedigreestudyconfirmedthecggrepeatexpansionofrilpl1isassociatedwithoculopharyngodistalmyopathy
AT lingchao largepedigreestudyconfirmedthecggrepeatexpansionofrilpl1isassociatedwithoculopharyngodistalmyopathy
AT wangyang largepedigreestudyconfirmedthecggrepeatexpansionofrilpl1isassociatedwithoculopharyngodistalmyopathy
AT fanyu largepedigreestudyconfirmedthecggrepeatexpansionofrilpl1isassociatedwithoculopharyngodistalmyopathy
AT shenjianxiong largepedigreestudyconfirmedthecggrepeatexpansionofrilpl1isassociatedwithoculopharyngodistalmyopathy
AT zhuyicheng largepedigreestudyconfirmedthecggrepeatexpansionofrilpl1isassociatedwithoculopharyngodistalmyopathy
AT wangdepeng largepedigreestudyconfirmedthecggrepeatexpansionofrilpl1isassociatedwithoculopharyngodistalmyopathy
AT cuiliying largepedigreestudyconfirmedthecggrepeatexpansionofrilpl1isassociatedwithoculopharyngodistalmyopathy
AT chenlin largepedigreestudyconfirmedthecggrepeatexpansionofrilpl1isassociatedwithoculopharyngodistalmyopathy
AT shichanghe largepedigreestudyconfirmedthecggrepeatexpansionofrilpl1isassociatedwithoculopharyngodistalmyopathy
AT daiyi largepedigreestudyconfirmedthecggrepeatexpansionofrilpl1isassociatedwithoculopharyngodistalmyopathy