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A multi-center performance assessment for automated histopathological classification and grading of glioma using whole slide images
Accurate pathological classification and grading of gliomas is crucial in clinical diagnosis and treatment. The application of deep learning techniques holds promise for automated histological pathology diagnosis. In this study, we collected 733 whole slide images from four medical centers, of which...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10590813/ https://www.ncbi.nlm.nih.gov/pubmed/37876818 http://dx.doi.org/10.1016/j.isci.2023.108041 |
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author | Jin, Lei Sun, Tianyang Liu, Xi Cao, Zehong Liu, Yan Chen, Hong Ma, Yixin Zhang, Jun Zou, Yaping Liu, Yingchao Shi, Feng Shen, Dinggang Wu, Jinsong |
author_facet | Jin, Lei Sun, Tianyang Liu, Xi Cao, Zehong Liu, Yan Chen, Hong Ma, Yixin Zhang, Jun Zou, Yaping Liu, Yingchao Shi, Feng Shen, Dinggang Wu, Jinsong |
author_sort | Jin, Lei |
collection | PubMed |
description | Accurate pathological classification and grading of gliomas is crucial in clinical diagnosis and treatment. The application of deep learning techniques holds promise for automated histological pathology diagnosis. In this study, we collected 733 whole slide images from four medical centers, of which 456 were used for model training, 150 for internal validation, and 127 for multi-center testing. The study includes 5 types of common gliomas. A subtask-guided multi-instance learning image-to-label training pipeline was employed. The pipeline leveraged “patch prompting” for the model to converge with reasonable computational cost. Experiments showed that an overall accuracy of 0.79 in the internal validation dataset. The performance on the multi-center testing dataset showed an overall accuracy to 0.73. The findings suggest a minor yet acceptable performance decrease in multi-center data, demonstrating the model’s strong generalizability and establishing a robust foundation for future clinical applications. |
format | Online Article Text |
id | pubmed-10590813 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-105908132023-10-24 A multi-center performance assessment for automated histopathological classification and grading of glioma using whole slide images Jin, Lei Sun, Tianyang Liu, Xi Cao, Zehong Liu, Yan Chen, Hong Ma, Yixin Zhang, Jun Zou, Yaping Liu, Yingchao Shi, Feng Shen, Dinggang Wu, Jinsong iScience Article Accurate pathological classification and grading of gliomas is crucial in clinical diagnosis and treatment. The application of deep learning techniques holds promise for automated histological pathology diagnosis. In this study, we collected 733 whole slide images from four medical centers, of which 456 were used for model training, 150 for internal validation, and 127 for multi-center testing. The study includes 5 types of common gliomas. A subtask-guided multi-instance learning image-to-label training pipeline was employed. The pipeline leveraged “patch prompting” for the model to converge with reasonable computational cost. Experiments showed that an overall accuracy of 0.79 in the internal validation dataset. The performance on the multi-center testing dataset showed an overall accuracy to 0.73. The findings suggest a minor yet acceptable performance decrease in multi-center data, demonstrating the model’s strong generalizability and establishing a robust foundation for future clinical applications. Elsevier 2023-09-29 /pmc/articles/PMC10590813/ /pubmed/37876818 http://dx.doi.org/10.1016/j.isci.2023.108041 Text en © 2023 The Author(s) https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Article Jin, Lei Sun, Tianyang Liu, Xi Cao, Zehong Liu, Yan Chen, Hong Ma, Yixin Zhang, Jun Zou, Yaping Liu, Yingchao Shi, Feng Shen, Dinggang Wu, Jinsong A multi-center performance assessment for automated histopathological classification and grading of glioma using whole slide images |
title | A multi-center performance assessment for automated histopathological classification and grading of glioma using whole slide images |
title_full | A multi-center performance assessment for automated histopathological classification and grading of glioma using whole slide images |
title_fullStr | A multi-center performance assessment for automated histopathological classification and grading of glioma using whole slide images |
title_full_unstemmed | A multi-center performance assessment for automated histopathological classification and grading of glioma using whole slide images |
title_short | A multi-center performance assessment for automated histopathological classification and grading of glioma using whole slide images |
title_sort | multi-center performance assessment for automated histopathological classification and grading of glioma using whole slide images |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10590813/ https://www.ncbi.nlm.nih.gov/pubmed/37876818 http://dx.doi.org/10.1016/j.isci.2023.108041 |
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