Cargando…

Deriving Explainable Metrics of Left Ventricular Flow by Reduced-Order Modeling and Classification

BACKGROUND: Extracting explainable flow metrics is a bottleneck to the clinical translation of advanced cardiac flow imaging modalities. We hypothesized that reduced-order models (ROMs) of intraventricular flow are a suitable strategy for deriving simple and interpretable clinical metrics suitable f...

Descripción completa

Detalles Bibliográficos
Autores principales: Borja, María Guadalupe, Martinez-Legazpi, Pablo, Nguyen, Cathleen, Flores, Oscar, Kahn, Andrew M., Bermejo, Javier, del Álamo, Juan C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10593009/
https://www.ncbi.nlm.nih.gov/pubmed/37873442
http://dx.doi.org/10.1101/2023.10.03.23296524
_version_ 1785124378659258368
author Borja, María Guadalupe
Martinez-Legazpi, Pablo
Nguyen, Cathleen
Flores, Oscar
Kahn, Andrew M.
Bermejo, Javier
del Álamo, Juan C.
author_facet Borja, María Guadalupe
Martinez-Legazpi, Pablo
Nguyen, Cathleen
Flores, Oscar
Kahn, Andrew M.
Bermejo, Javier
del Álamo, Juan C.
author_sort Borja, María Guadalupe
collection PubMed
description BACKGROUND: Extracting explainable flow metrics is a bottleneck to the clinical translation of advanced cardiac flow imaging modalities. We hypothesized that reduced-order models (ROMs) of intraventricular flow are a suitable strategy for deriving simple and interpretable clinical metrics suitable for further assessments. Combined with machine learning (ML) flow-based ROMs could provide new insight to help diagnose and risk-stratify patients. METHODS: We analyzed 2D color-Doppler echocardiograms of 81 non-ischemic dilated cardiomyopathy (DCM) patients, 51 hypertrophic cardiomyopathy (HCM) patients, and 77 normal volunteers (Control). We applied proper orthogonal decomposition (POD) to build patient-specific and cohort-specific ROMs of LV flow. Each ROM aggregates a low number of components representing a spatially dependent velocity map modulated along the cardiac cycle by a time-dependent coefficient. We tested three classifiers using deliberately simple ML analyses of these ROMs with varying supervision levels. In supervised models, hyperparameter gridsearch was used to derive the ROMs that maximize classification power. The classifiers were blinded to LV chamber geometry and function. We ran vector flow mapping on the color-Doppler sequences to help visualize flow patterns and interpret the ML results. RESULTS: POD-based ROMs stably represented each cohort through 10-fold cross-validation. The principal POD mode captured >80% of the flow kinetic energy (KE) in all cohorts and represented the LV filling/emptying jets. Mode 2 represented the diastolic vortex and its KE contribution ranged from <1% (HCM) to 13% (DCM). Semi-unsupervised classification using patient-specific ROMs revealed that the KE ratio of these two principal modes, the vortex-to-jet (V2J) energy ratio, is a simple, interpretable metric that discriminates DCM, HCM, and Control patients. Receiver operating characteristic curves using V2J as classifier had areas under the curve of 0.81, 0.91, and 0.95 for distinguishing HCM vs. Control, DCM vs. Control, and DCM vs. HCM, respectively. CONCLUSIONS: Modal decomposition of cardiac flow can be used to create ROMs of normal and pathological flow patterns, uncovering simple interpretable flow metrics with power to discriminate disease states, and particularly suitable for further processing using ML.
format Online
Article
Text
id pubmed-10593009
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Cold Spring Harbor Laboratory
record_format MEDLINE/PubMed
spelling pubmed-105930092023-10-24 Deriving Explainable Metrics of Left Ventricular Flow by Reduced-Order Modeling and Classification Borja, María Guadalupe Martinez-Legazpi, Pablo Nguyen, Cathleen Flores, Oscar Kahn, Andrew M. Bermejo, Javier del Álamo, Juan C. medRxiv Article BACKGROUND: Extracting explainable flow metrics is a bottleneck to the clinical translation of advanced cardiac flow imaging modalities. We hypothesized that reduced-order models (ROMs) of intraventricular flow are a suitable strategy for deriving simple and interpretable clinical metrics suitable for further assessments. Combined with machine learning (ML) flow-based ROMs could provide new insight to help diagnose and risk-stratify patients. METHODS: We analyzed 2D color-Doppler echocardiograms of 81 non-ischemic dilated cardiomyopathy (DCM) patients, 51 hypertrophic cardiomyopathy (HCM) patients, and 77 normal volunteers (Control). We applied proper orthogonal decomposition (POD) to build patient-specific and cohort-specific ROMs of LV flow. Each ROM aggregates a low number of components representing a spatially dependent velocity map modulated along the cardiac cycle by a time-dependent coefficient. We tested three classifiers using deliberately simple ML analyses of these ROMs with varying supervision levels. In supervised models, hyperparameter gridsearch was used to derive the ROMs that maximize classification power. The classifiers were blinded to LV chamber geometry and function. We ran vector flow mapping on the color-Doppler sequences to help visualize flow patterns and interpret the ML results. RESULTS: POD-based ROMs stably represented each cohort through 10-fold cross-validation. The principal POD mode captured >80% of the flow kinetic energy (KE) in all cohorts and represented the LV filling/emptying jets. Mode 2 represented the diastolic vortex and its KE contribution ranged from <1% (HCM) to 13% (DCM). Semi-unsupervised classification using patient-specific ROMs revealed that the KE ratio of these two principal modes, the vortex-to-jet (V2J) energy ratio, is a simple, interpretable metric that discriminates DCM, HCM, and Control patients. Receiver operating characteristic curves using V2J as classifier had areas under the curve of 0.81, 0.91, and 0.95 for distinguishing HCM vs. Control, DCM vs. Control, and DCM vs. HCM, respectively. CONCLUSIONS: Modal decomposition of cardiac flow can be used to create ROMs of normal and pathological flow patterns, uncovering simple interpretable flow metrics with power to discriminate disease states, and particularly suitable for further processing using ML. Cold Spring Harbor Laboratory 2023-10-05 /pmc/articles/PMC10593009/ /pubmed/37873442 http://dx.doi.org/10.1101/2023.10.03.23296524 Text en https://creativecommons.org/licenses/by-nc-nd/4.0/This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License (https://creativecommons.org/licenses/by-nc-nd/4.0/) , which allows reusers to copy and distribute the material in any medium or format in unadapted form only, for noncommercial purposes only, and only so long as attribution is given to the creator.
spellingShingle Article
Borja, María Guadalupe
Martinez-Legazpi, Pablo
Nguyen, Cathleen
Flores, Oscar
Kahn, Andrew M.
Bermejo, Javier
del Álamo, Juan C.
Deriving Explainable Metrics of Left Ventricular Flow by Reduced-Order Modeling and Classification
title Deriving Explainable Metrics of Left Ventricular Flow by Reduced-Order Modeling and Classification
title_full Deriving Explainable Metrics of Left Ventricular Flow by Reduced-Order Modeling and Classification
title_fullStr Deriving Explainable Metrics of Left Ventricular Flow by Reduced-Order Modeling and Classification
title_full_unstemmed Deriving Explainable Metrics of Left Ventricular Flow by Reduced-Order Modeling and Classification
title_short Deriving Explainable Metrics of Left Ventricular Flow by Reduced-Order Modeling and Classification
title_sort deriving explainable metrics of left ventricular flow by reduced-order modeling and classification
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10593009/
https://www.ncbi.nlm.nih.gov/pubmed/37873442
http://dx.doi.org/10.1101/2023.10.03.23296524
work_keys_str_mv AT borjamariaguadalupe derivingexplainablemetricsofleftventricularflowbyreducedordermodelingandclassification
AT martinezlegazpipablo derivingexplainablemetricsofleftventricularflowbyreducedordermodelingandclassification
AT nguyencathleen derivingexplainablemetricsofleftventricularflowbyreducedordermodelingandclassification
AT floresoscar derivingexplainablemetricsofleftventricularflowbyreducedordermodelingandclassification
AT kahnandrewm derivingexplainablemetricsofleftventricularflowbyreducedordermodelingandclassification
AT bermejojavier derivingexplainablemetricsofleftventricularflowbyreducedordermodelingandclassification
AT delalamojuanc derivingexplainablemetricsofleftventricularflowbyreducedordermodelingandclassification