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Ab Initio investigation for DNA nucleotide bases sequencing using chiral carbon nanobelts and nanotubes
Understanding the interaction mechanism between DNA nucleotide bases and carbon nanomaterials is an important issue in the field of identifying nucleotide molecules sequencing. In this article, the adsorption behavior of DNA nucleotide bases on the external surface of chiral carbon nanobelts (CNBs)...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10593758/ https://www.ncbi.nlm.nih.gov/pubmed/37872194 http://dx.doi.org/10.1038/s41598-023-45361-3 |
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author | Monavari, Seyyed Mostafa Memarian, Nafiseh |
author_facet | Monavari, Seyyed Mostafa Memarian, Nafiseh |
author_sort | Monavari, Seyyed Mostafa |
collection | PubMed |
description | Understanding the interaction mechanism between DNA nucleotide bases and carbon nanomaterials is an important issue in the field of identifying nucleotide molecules sequencing. In this article, the adsorption behavior of DNA nucleotide bases on the external surface of chiral carbon nanobelts (CNBs) (6, 5), (7, 6) and (8, 6), was comprehensively investigated from electronic and optical perspectives. As a result, it was determined that the DNA nucleotide bases have optical absorption in the ultraviolet region. When bases are adsorbed on the surface of CNBs, the optical absorption peak of the new complex structure shifted to the visible region. The study of the optical properties of selected CNBs showed that CNB (6,5) performs better in detecting Cytosine and the red shift in the absorption spectrum of complex structure is noticeable. Also, the effect of infinite length for chiral CNTs in DNA nucleotide base sequencing was investigated using DFTB approach. Our investigations based on electronic properties showed that CNTs have better performance than CNBs in DNA nucleotide base sequencing. |
format | Online Article Text |
id | pubmed-10593758 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-105937582023-10-25 Ab Initio investigation for DNA nucleotide bases sequencing using chiral carbon nanobelts and nanotubes Monavari, Seyyed Mostafa Memarian, Nafiseh Sci Rep Article Understanding the interaction mechanism between DNA nucleotide bases and carbon nanomaterials is an important issue in the field of identifying nucleotide molecules sequencing. In this article, the adsorption behavior of DNA nucleotide bases on the external surface of chiral carbon nanobelts (CNBs) (6, 5), (7, 6) and (8, 6), was comprehensively investigated from electronic and optical perspectives. As a result, it was determined that the DNA nucleotide bases have optical absorption in the ultraviolet region. When bases are adsorbed on the surface of CNBs, the optical absorption peak of the new complex structure shifted to the visible region. The study of the optical properties of selected CNBs showed that CNB (6,5) performs better in detecting Cytosine and the red shift in the absorption spectrum of complex structure is noticeable. Also, the effect of infinite length for chiral CNTs in DNA nucleotide base sequencing was investigated using DFTB approach. Our investigations based on electronic properties showed that CNTs have better performance than CNBs in DNA nucleotide base sequencing. Nature Publishing Group UK 2023-10-23 /pmc/articles/PMC10593758/ /pubmed/37872194 http://dx.doi.org/10.1038/s41598-023-45361-3 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Monavari, Seyyed Mostafa Memarian, Nafiseh Ab Initio investigation for DNA nucleotide bases sequencing using chiral carbon nanobelts and nanotubes |
title | Ab Initio investigation for DNA nucleotide bases sequencing using chiral carbon nanobelts and nanotubes |
title_full | Ab Initio investigation for DNA nucleotide bases sequencing using chiral carbon nanobelts and nanotubes |
title_fullStr | Ab Initio investigation for DNA nucleotide bases sequencing using chiral carbon nanobelts and nanotubes |
title_full_unstemmed | Ab Initio investigation for DNA nucleotide bases sequencing using chiral carbon nanobelts and nanotubes |
title_short | Ab Initio investigation for DNA nucleotide bases sequencing using chiral carbon nanobelts and nanotubes |
title_sort | ab initio investigation for dna nucleotide bases sequencing using chiral carbon nanobelts and nanotubes |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10593758/ https://www.ncbi.nlm.nih.gov/pubmed/37872194 http://dx.doi.org/10.1038/s41598-023-45361-3 |
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