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Ab Initio investigation for DNA nucleotide bases sequencing using chiral carbon nanobelts and nanotubes

Understanding the interaction mechanism between DNA nucleotide bases and carbon nanomaterials is an important issue in the field of identifying nucleotide molecules sequencing. In this article, the adsorption behavior of DNA nucleotide bases on the external surface of chiral carbon nanobelts (CNBs)...

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Autores principales: Monavari, Seyyed Mostafa, Memarian, Nafiseh
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10593758/
https://www.ncbi.nlm.nih.gov/pubmed/37872194
http://dx.doi.org/10.1038/s41598-023-45361-3
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author Monavari, Seyyed Mostafa
Memarian, Nafiseh
author_facet Monavari, Seyyed Mostafa
Memarian, Nafiseh
author_sort Monavari, Seyyed Mostafa
collection PubMed
description Understanding the interaction mechanism between DNA nucleotide bases and carbon nanomaterials is an important issue in the field of identifying nucleotide molecules sequencing. In this article, the adsorption behavior of DNA nucleotide bases on the external surface of chiral carbon nanobelts (CNBs) (6, 5), (7, 6) and (8, 6), was comprehensively investigated from electronic and optical perspectives. As a result, it was determined that the DNA nucleotide bases have optical absorption in the ultraviolet region. When bases are adsorbed on the surface of CNBs, the optical absorption peak of the new complex structure shifted to the visible region. The study of the optical properties of selected CNBs showed that CNB (6,5) performs better in detecting Cytosine and the red shift in the absorption spectrum of complex structure is noticeable. Also, the effect of infinite length for chiral CNTs in DNA nucleotide base sequencing was investigated using DFTB approach. Our investigations based on electronic properties showed that CNTs have better performance than CNBs in DNA nucleotide base sequencing.
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spelling pubmed-105937582023-10-25 Ab Initio investigation for DNA nucleotide bases sequencing using chiral carbon nanobelts and nanotubes Monavari, Seyyed Mostafa Memarian, Nafiseh Sci Rep Article Understanding the interaction mechanism between DNA nucleotide bases and carbon nanomaterials is an important issue in the field of identifying nucleotide molecules sequencing. In this article, the adsorption behavior of DNA nucleotide bases on the external surface of chiral carbon nanobelts (CNBs) (6, 5), (7, 6) and (8, 6), was comprehensively investigated from electronic and optical perspectives. As a result, it was determined that the DNA nucleotide bases have optical absorption in the ultraviolet region. When bases are adsorbed on the surface of CNBs, the optical absorption peak of the new complex structure shifted to the visible region. The study of the optical properties of selected CNBs showed that CNB (6,5) performs better in detecting Cytosine and the red shift in the absorption spectrum of complex structure is noticeable. Also, the effect of infinite length for chiral CNTs in DNA nucleotide base sequencing was investigated using DFTB approach. Our investigations based on electronic properties showed that CNTs have better performance than CNBs in DNA nucleotide base sequencing. Nature Publishing Group UK 2023-10-23 /pmc/articles/PMC10593758/ /pubmed/37872194 http://dx.doi.org/10.1038/s41598-023-45361-3 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Monavari, Seyyed Mostafa
Memarian, Nafiseh
Ab Initio investigation for DNA nucleotide bases sequencing using chiral carbon nanobelts and nanotubes
title Ab Initio investigation for DNA nucleotide bases sequencing using chiral carbon nanobelts and nanotubes
title_full Ab Initio investigation for DNA nucleotide bases sequencing using chiral carbon nanobelts and nanotubes
title_fullStr Ab Initio investigation for DNA nucleotide bases sequencing using chiral carbon nanobelts and nanotubes
title_full_unstemmed Ab Initio investigation for DNA nucleotide bases sequencing using chiral carbon nanobelts and nanotubes
title_short Ab Initio investigation for DNA nucleotide bases sequencing using chiral carbon nanobelts and nanotubes
title_sort ab initio investigation for dna nucleotide bases sequencing using chiral carbon nanobelts and nanotubes
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10593758/
https://www.ncbi.nlm.nih.gov/pubmed/37872194
http://dx.doi.org/10.1038/s41598-023-45361-3
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