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C2CAplus: A One-Pot Isothermal Circle-to-Circle DNA Amplification System

[Image: see text] Rolling circle amplification (RCA) is a widely used DNA amplification method that uses circular template DNA as input and produces multimeric, linear single- or double-stranded DNA. Circle-to-circle amplification (C2CA) has further expanded this method by implementing product recir...

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Autores principales: Grasemann, Laura, Thiel Pizarro, Paula, Maerkl, Sebastian J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2023
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10594867/
https://www.ncbi.nlm.nih.gov/pubmed/37729629
http://dx.doi.org/10.1021/acssynbio.3c00390
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author Grasemann, Laura
Thiel Pizarro, Paula
Maerkl, Sebastian J.
author_facet Grasemann, Laura
Thiel Pizarro, Paula
Maerkl, Sebastian J.
author_sort Grasemann, Laura
collection PubMed
description [Image: see text] Rolling circle amplification (RCA) is a widely used DNA amplification method that uses circular template DNA as input and produces multimeric, linear single- or double-stranded DNA. Circle-to-circle amplification (C2CA) has further expanded this method by implementing product recircularization using restriction and ligation, leading to a higher amplification yield and enabling the generation of circular products. However, C2CA is a multistep, nonisothermal method, requiring multiple fluid manipulations and thereby compromises several advantages of RCA. Here, we improved C2CA to implement a one-pot, single step, isothermal reaction at temperatures ranging from 25 to 37 °C. Our C2CAplus method is simple, robust, and produces large quantities of product DNA that can be seen with the naked eye.
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spelling pubmed-105948672023-10-25 C2CAplus: A One-Pot Isothermal Circle-to-Circle DNA Amplification System Grasemann, Laura Thiel Pizarro, Paula Maerkl, Sebastian J. ACS Synth Biol [Image: see text] Rolling circle amplification (RCA) is a widely used DNA amplification method that uses circular template DNA as input and produces multimeric, linear single- or double-stranded DNA. Circle-to-circle amplification (C2CA) has further expanded this method by implementing product recircularization using restriction and ligation, leading to a higher amplification yield and enabling the generation of circular products. However, C2CA is a multistep, nonisothermal method, requiring multiple fluid manipulations and thereby compromises several advantages of RCA. Here, we improved C2CA to implement a one-pot, single step, isothermal reaction at temperatures ranging from 25 to 37 °C. Our C2CAplus method is simple, robust, and produces large quantities of product DNA that can be seen with the naked eye. American Chemical Society 2023-09-20 /pmc/articles/PMC10594867/ /pubmed/37729629 http://dx.doi.org/10.1021/acssynbio.3c00390 Text en © 2023 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Grasemann, Laura
Thiel Pizarro, Paula
Maerkl, Sebastian J.
C2CAplus: A One-Pot Isothermal Circle-to-Circle DNA Amplification System
title C2CAplus: A One-Pot Isothermal Circle-to-Circle DNA Amplification System
title_full C2CAplus: A One-Pot Isothermal Circle-to-Circle DNA Amplification System
title_fullStr C2CAplus: A One-Pot Isothermal Circle-to-Circle DNA Amplification System
title_full_unstemmed C2CAplus: A One-Pot Isothermal Circle-to-Circle DNA Amplification System
title_short C2CAplus: A One-Pot Isothermal Circle-to-Circle DNA Amplification System
title_sort c2caplus: a one-pot isothermal circle-to-circle dna amplification system
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10594867/
https://www.ncbi.nlm.nih.gov/pubmed/37729629
http://dx.doi.org/10.1021/acssynbio.3c00390
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