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Uncertainty-inspired open set learning for retinal anomaly identification
Failure to recognize samples from the classes unseen during training is a major limitation of artificial intelligence in the real-world implementation for recognition and classification of retinal anomalies. We establish an uncertainty-inspired open set (UIOS) model, which is trained with fundus ima...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10598011/ https://www.ncbi.nlm.nih.gov/pubmed/37875484 http://dx.doi.org/10.1038/s41467-023-42444-7 |
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author | Wang, Meng Lin, Tian Wang, Lianyu Lin, Aidi Zou, Ke Xu, Xinxing Zhou, Yi Peng, Yuanyuan Meng, Qingquan Qian, Yiming Deng, Guoyao Wu, Zhiqun Chen, Junhong Lin, Jianhong Zhang, Mingzhi Zhu, Weifang Zhang, Changqing Zhang, Daoqiang Goh, Rick Siow Mong Liu, Yong Pang, Chi Pui Chen, Xinjian Chen, Haoyu Fu, Huazhu |
author_facet | Wang, Meng Lin, Tian Wang, Lianyu Lin, Aidi Zou, Ke Xu, Xinxing Zhou, Yi Peng, Yuanyuan Meng, Qingquan Qian, Yiming Deng, Guoyao Wu, Zhiqun Chen, Junhong Lin, Jianhong Zhang, Mingzhi Zhu, Weifang Zhang, Changqing Zhang, Daoqiang Goh, Rick Siow Mong Liu, Yong Pang, Chi Pui Chen, Xinjian Chen, Haoyu Fu, Huazhu |
author_sort | Wang, Meng |
collection | PubMed |
description | Failure to recognize samples from the classes unseen during training is a major limitation of artificial intelligence in the real-world implementation for recognition and classification of retinal anomalies. We establish an uncertainty-inspired open set (UIOS) model, which is trained with fundus images of 9 retinal conditions. Besides assessing the probability of each category, UIOS also calculates an uncertainty score to express its confidence. Our UIOS model with thresholding strategy achieves an F1 score of 99.55%, 97.01% and 91.91% for the internal testing set, external target categories (TC)-JSIEC dataset and TC-unseen testing set, respectively, compared to the F1 score of 92.20%, 80.69% and 64.74% by the standard AI model. Furthermore, UIOS correctly predicts high uncertainty scores, which would prompt the need for a manual check in the datasets of non-target categories retinal diseases, low-quality fundus images, and non-fundus images. UIOS provides a robust method for real-world screening of retinal anomalies. |
format | Online Article Text |
id | pubmed-10598011 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-105980112023-10-26 Uncertainty-inspired open set learning for retinal anomaly identification Wang, Meng Lin, Tian Wang, Lianyu Lin, Aidi Zou, Ke Xu, Xinxing Zhou, Yi Peng, Yuanyuan Meng, Qingquan Qian, Yiming Deng, Guoyao Wu, Zhiqun Chen, Junhong Lin, Jianhong Zhang, Mingzhi Zhu, Weifang Zhang, Changqing Zhang, Daoqiang Goh, Rick Siow Mong Liu, Yong Pang, Chi Pui Chen, Xinjian Chen, Haoyu Fu, Huazhu Nat Commun Article Failure to recognize samples from the classes unseen during training is a major limitation of artificial intelligence in the real-world implementation for recognition and classification of retinal anomalies. We establish an uncertainty-inspired open set (UIOS) model, which is trained with fundus images of 9 retinal conditions. Besides assessing the probability of each category, UIOS also calculates an uncertainty score to express its confidence. Our UIOS model with thresholding strategy achieves an F1 score of 99.55%, 97.01% and 91.91% for the internal testing set, external target categories (TC)-JSIEC dataset and TC-unseen testing set, respectively, compared to the F1 score of 92.20%, 80.69% and 64.74% by the standard AI model. Furthermore, UIOS correctly predicts high uncertainty scores, which would prompt the need for a manual check in the datasets of non-target categories retinal diseases, low-quality fundus images, and non-fundus images. UIOS provides a robust method for real-world screening of retinal anomalies. Nature Publishing Group UK 2023-10-24 /pmc/articles/PMC10598011/ /pubmed/37875484 http://dx.doi.org/10.1038/s41467-023-42444-7 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Wang, Meng Lin, Tian Wang, Lianyu Lin, Aidi Zou, Ke Xu, Xinxing Zhou, Yi Peng, Yuanyuan Meng, Qingquan Qian, Yiming Deng, Guoyao Wu, Zhiqun Chen, Junhong Lin, Jianhong Zhang, Mingzhi Zhu, Weifang Zhang, Changqing Zhang, Daoqiang Goh, Rick Siow Mong Liu, Yong Pang, Chi Pui Chen, Xinjian Chen, Haoyu Fu, Huazhu Uncertainty-inspired open set learning for retinal anomaly identification |
title | Uncertainty-inspired open set learning for retinal anomaly identification |
title_full | Uncertainty-inspired open set learning for retinal anomaly identification |
title_fullStr | Uncertainty-inspired open set learning for retinal anomaly identification |
title_full_unstemmed | Uncertainty-inspired open set learning for retinal anomaly identification |
title_short | Uncertainty-inspired open set learning for retinal anomaly identification |
title_sort | uncertainty-inspired open set learning for retinal anomaly identification |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10598011/ https://www.ncbi.nlm.nih.gov/pubmed/37875484 http://dx.doi.org/10.1038/s41467-023-42444-7 |
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