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Genomic signatures of convergent shifts to plunge-diving behavior in birds

Understanding the genetic basis of convergence at broad phylogenetic scales remains a key challenge in biology. Kingfishers (Aves: Alcedinidae) are a cosmopolitan avian radiation with diverse colors, diets, and feeding behaviors—including the archetypal plunge-dive into water. Given the sensory and...

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Autores principales: Eliason, Chad M., Mellenthin, Lauren E., Hains, Taylor, McCullough, Jenna M., Pirro, Stacy, Andersen, Michael J., Hackett, Shannon J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10598022/
https://www.ncbi.nlm.nih.gov/pubmed/37875535
http://dx.doi.org/10.1038/s42003-023-05359-z
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author Eliason, Chad M.
Mellenthin, Lauren E.
Hains, Taylor
McCullough, Jenna M.
Pirro, Stacy
Andersen, Michael J.
Hackett, Shannon J.
author_facet Eliason, Chad M.
Mellenthin, Lauren E.
Hains, Taylor
McCullough, Jenna M.
Pirro, Stacy
Andersen, Michael J.
Hackett, Shannon J.
author_sort Eliason, Chad M.
collection PubMed
description Understanding the genetic basis of convergence at broad phylogenetic scales remains a key challenge in biology. Kingfishers (Aves: Alcedinidae) are a cosmopolitan avian radiation with diverse colors, diets, and feeding behaviors—including the archetypal plunge-dive into water. Given the sensory and locomotor challenges associated with air-water transitions, kingfishers offer a powerful opportunity to explore the effects of convergent behaviors on the evolution of genomes and phenotypes, as well as direct comparisons between continental and island lineages. Here, we use whole-genome sequencing of 30 diverse kingfisher species to identify the genomic signatures associated with convergent feeding behaviors. We show that species with smaller ranges (i.e., on islands) have experienced stronger demographic fluctuations than those on continents, and that these differences have influenced the dynamics of molecular evolution. Comparative genomic analyses reveal positive selection and genomic convergence in brain and dietary genes in plunge-divers. These findings enhance our understanding of the connections between genotype and phenotype in a diverse avian radiation.
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spelling pubmed-105980222023-10-26 Genomic signatures of convergent shifts to plunge-diving behavior in birds Eliason, Chad M. Mellenthin, Lauren E. Hains, Taylor McCullough, Jenna M. Pirro, Stacy Andersen, Michael J. Hackett, Shannon J. Commun Biol Article Understanding the genetic basis of convergence at broad phylogenetic scales remains a key challenge in biology. Kingfishers (Aves: Alcedinidae) are a cosmopolitan avian radiation with diverse colors, diets, and feeding behaviors—including the archetypal plunge-dive into water. Given the sensory and locomotor challenges associated with air-water transitions, kingfishers offer a powerful opportunity to explore the effects of convergent behaviors on the evolution of genomes and phenotypes, as well as direct comparisons between continental and island lineages. Here, we use whole-genome sequencing of 30 diverse kingfisher species to identify the genomic signatures associated with convergent feeding behaviors. We show that species with smaller ranges (i.e., on islands) have experienced stronger demographic fluctuations than those on continents, and that these differences have influenced the dynamics of molecular evolution. Comparative genomic analyses reveal positive selection and genomic convergence in brain and dietary genes in plunge-divers. These findings enhance our understanding of the connections between genotype and phenotype in a diverse avian radiation. Nature Publishing Group UK 2023-10-24 /pmc/articles/PMC10598022/ /pubmed/37875535 http://dx.doi.org/10.1038/s42003-023-05359-z Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Eliason, Chad M.
Mellenthin, Lauren E.
Hains, Taylor
McCullough, Jenna M.
Pirro, Stacy
Andersen, Michael J.
Hackett, Shannon J.
Genomic signatures of convergent shifts to plunge-diving behavior in birds
title Genomic signatures of convergent shifts to plunge-diving behavior in birds
title_full Genomic signatures of convergent shifts to plunge-diving behavior in birds
title_fullStr Genomic signatures of convergent shifts to plunge-diving behavior in birds
title_full_unstemmed Genomic signatures of convergent shifts to plunge-diving behavior in birds
title_short Genomic signatures of convergent shifts to plunge-diving behavior in birds
title_sort genomic signatures of convergent shifts to plunge-diving behavior in birds
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10598022/
https://www.ncbi.nlm.nih.gov/pubmed/37875535
http://dx.doi.org/10.1038/s42003-023-05359-z
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