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Insights from the molecular docking analysis of gambogic acid with the Chikungunya spike glycoprotein E2
Chikungunya fever is a mosquito-borne disease caused by the chikungunya virus (CHIKV) and has drawn substantial attention in recent years. So far, no effective treatment is available in the form of drugs or vaccines. In this study, we aimed to screen some drugs against the pathogenic Chikungunya vir...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Biomedical Informatics
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10599661/ https://www.ncbi.nlm.nih.gov/pubmed/37886138 http://dx.doi.org/10.6026/97320630019525 |
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author | Qamar, Sadia Syeda, Amna Amjad Beg, M Irfan Qureshi, M |
author_facet | Qamar, Sadia Syeda, Amna Amjad Beg, M Irfan Qureshi, M |
author_sort | Qamar, Sadia |
collection | PubMed |
description | Chikungunya fever is a mosquito-borne disease caused by the chikungunya virus (CHIKV) and has drawn substantial attention in recent years. So far, no effective treatment is available in the form of drugs or vaccines. In this study, we aimed to screen some drugs against the pathogenic Chikungunya virus through a molecular docking approach. As a fact, the spike E2 protein plays an important role in viral attachment to the human host cell, binding to a cell receptor MXRA8. The molecules screened for in-silico interaction against MXRA8 were selected with top hit based on binding affinity. The existing intermolecular bonds were investigated further in the active site of the protein that interacts with the top-hit ligands. Gambogic acid (guttic acid) was depicted as the furthermost potential inhibitor when compared to the others it had the lowest binding affinity (-10.9 kcal/mol). Gambogic acid, as a potential antiviral agent against the spike E2 protein, could be a promising candidate. |
format | Online Article Text |
id | pubmed-10599661 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Biomedical Informatics |
record_format | MEDLINE/PubMed |
spelling | pubmed-105996612023-10-26 Insights from the molecular docking analysis of gambogic acid with the Chikungunya spike glycoprotein E2 Qamar, Sadia Syeda, Amna Amjad Beg, M Irfan Qureshi, M Bioinformation Research Article Chikungunya fever is a mosquito-borne disease caused by the chikungunya virus (CHIKV) and has drawn substantial attention in recent years. So far, no effective treatment is available in the form of drugs or vaccines. In this study, we aimed to screen some drugs against the pathogenic Chikungunya virus through a molecular docking approach. As a fact, the spike E2 protein plays an important role in viral attachment to the human host cell, binding to a cell receptor MXRA8. The molecules screened for in-silico interaction against MXRA8 were selected with top hit based on binding affinity. The existing intermolecular bonds were investigated further in the active site of the protein that interacts with the top-hit ligands. Gambogic acid (guttic acid) was depicted as the furthermost potential inhibitor when compared to the others it had the lowest binding affinity (-10.9 kcal/mol). Gambogic acid, as a potential antiviral agent against the spike E2 protein, could be a promising candidate. Biomedical Informatics 2023-05-31 /pmc/articles/PMC10599661/ /pubmed/37886138 http://dx.doi.org/10.6026/97320630019525 Text en © 2023 Biomedical Informatics https://creativecommons.org/licenses/by/3.0/This is an Open Access article which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. This is distributed under the terms of the Creative Commons Attribution License. |
spellingShingle | Research Article Qamar, Sadia Syeda, Amna Amjad Beg, M Irfan Qureshi, M Insights from the molecular docking analysis of gambogic acid with the Chikungunya spike glycoprotein E2 |
title | Insights from the molecular docking analysis of gambogic acid with the Chikungunya spike glycoprotein E2 |
title_full | Insights from the molecular docking analysis of gambogic acid with the Chikungunya spike glycoprotein E2 |
title_fullStr | Insights from the molecular docking analysis of gambogic acid with the Chikungunya spike glycoprotein E2 |
title_full_unstemmed | Insights from the molecular docking analysis of gambogic acid with the Chikungunya spike glycoprotein E2 |
title_short | Insights from the molecular docking analysis of gambogic acid with the Chikungunya spike glycoprotein E2 |
title_sort | insights from the molecular docking analysis of gambogic acid with the chikungunya spike glycoprotein e2 |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10599661/ https://www.ncbi.nlm.nih.gov/pubmed/37886138 http://dx.doi.org/10.6026/97320630019525 |
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