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Identification and validation of obesity related genes signature based on microenvironment phenotypes in prostate adenocarcinoma
Background: The role of obesity related genes (ORGs) in the immune checkpoint inhibitors (ICIs) treatment of prostate adenocarcinoma (PRAD) has not yet been proved by research. Methods: We comprehensively evaluated the ORGs patterns in PRAD based on tumor microenvironment (TME) phenotypes and immuno...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10599753/ https://www.ncbi.nlm.nih.gov/pubmed/37788005 http://dx.doi.org/10.18632/aging.205065 |
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author | Liang, Linghui Shang, Jinwei Zhang, Yuwei Xu, Yuxin Zhouteng, Yihui Wen, Jianxiang Zhao, Yuxin Feng, Ninghan Zhao, Ruizhe |
author_facet | Liang, Linghui Shang, Jinwei Zhang, Yuwei Xu, Yuxin Zhouteng, Yihui Wen, Jianxiang Zhao, Yuxin Feng, Ninghan Zhao, Ruizhe |
author_sort | Liang, Linghui |
collection | PubMed |
description | Background: The role of obesity related genes (ORGs) in the immune checkpoint inhibitors (ICIs) treatment of prostate adenocarcinoma (PRAD) has not yet been proved by research. Methods: We comprehensively evaluated the ORGs patterns in PRAD based on tumor microenvironment (TME) phenotypes and immunotherapy efficacies. Then we constructed a ORGs risk score for prognosis and a ORGs signature for accurate prediction of TME phenotype and immunotherapy efficacy in order to evaluate individual patients. Results: Two distinct ORGs patterns were generated. The two ORGs patterns were consistent with inflammatory and non-inflammatory TME phenotypes. ORGs patterns had an important role for predicting immunotherapy efficacies. Next, we constructed a ORGs risk score for predicting each patient’s prognosis with high performance in TCGA-PRAD. The ORGs risk score could be well verified in the external cohorts including GSE70769 and GSE21034. Then, we developed a ORGs signature and found it was significantly positively correlated with tumor-infiltrating lymphocytes in TCGA-PRAD. We found that each patient in the high-risk ORGs signature group represented a non-inflamed TME phenotype on the single cell level. The patients with high ORGs signature had more sensitivity to immunotherapy. And those ORGs were verified. Conclusions: ORGs pattern depicts different TME phenotypes in PRAD. The ORGs risk score and ORGs signature have an important role for predicting prognosis and immunotherapy efficacies. |
format | Online Article Text |
id | pubmed-10599753 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Impact Journals |
record_format | MEDLINE/PubMed |
spelling | pubmed-105997532023-10-26 Identification and validation of obesity related genes signature based on microenvironment phenotypes in prostate adenocarcinoma Liang, Linghui Shang, Jinwei Zhang, Yuwei Xu, Yuxin Zhouteng, Yihui Wen, Jianxiang Zhao, Yuxin Feng, Ninghan Zhao, Ruizhe Aging (Albany NY) Research Paper Background: The role of obesity related genes (ORGs) in the immune checkpoint inhibitors (ICIs) treatment of prostate adenocarcinoma (PRAD) has not yet been proved by research. Methods: We comprehensively evaluated the ORGs patterns in PRAD based on tumor microenvironment (TME) phenotypes and immunotherapy efficacies. Then we constructed a ORGs risk score for prognosis and a ORGs signature for accurate prediction of TME phenotype and immunotherapy efficacy in order to evaluate individual patients. Results: Two distinct ORGs patterns were generated. The two ORGs patterns were consistent with inflammatory and non-inflammatory TME phenotypes. ORGs patterns had an important role for predicting immunotherapy efficacies. Next, we constructed a ORGs risk score for predicting each patient’s prognosis with high performance in TCGA-PRAD. The ORGs risk score could be well verified in the external cohorts including GSE70769 and GSE21034. Then, we developed a ORGs signature and found it was significantly positively correlated with tumor-infiltrating lymphocytes in TCGA-PRAD. We found that each patient in the high-risk ORGs signature group represented a non-inflamed TME phenotype on the single cell level. The patients with high ORGs signature had more sensitivity to immunotherapy. And those ORGs were verified. Conclusions: ORGs pattern depicts different TME phenotypes in PRAD. The ORGs risk score and ORGs signature have an important role for predicting prognosis and immunotherapy efficacies. Impact Journals 2023-10-02 /pmc/articles/PMC10599753/ /pubmed/37788005 http://dx.doi.org/10.18632/aging.205065 Text en Copyright: © 2023 Liang et al. https://creativecommons.org/licenses/by/3.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper Liang, Linghui Shang, Jinwei Zhang, Yuwei Xu, Yuxin Zhouteng, Yihui Wen, Jianxiang Zhao, Yuxin Feng, Ninghan Zhao, Ruizhe Identification and validation of obesity related genes signature based on microenvironment phenotypes in prostate adenocarcinoma |
title | Identification and validation of obesity related genes signature based on microenvironment phenotypes in prostate adenocarcinoma |
title_full | Identification and validation of obesity related genes signature based on microenvironment phenotypes in prostate adenocarcinoma |
title_fullStr | Identification and validation of obesity related genes signature based on microenvironment phenotypes in prostate adenocarcinoma |
title_full_unstemmed | Identification and validation of obesity related genes signature based on microenvironment phenotypes in prostate adenocarcinoma |
title_short | Identification and validation of obesity related genes signature based on microenvironment phenotypes in prostate adenocarcinoma |
title_sort | identification and validation of obesity related genes signature based on microenvironment phenotypes in prostate adenocarcinoma |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10599753/ https://www.ncbi.nlm.nih.gov/pubmed/37788005 http://dx.doi.org/10.18632/aging.205065 |
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