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Molecular orbital and topological electron density study of n → π* interactions: amides and thioamides cases
The n → π* interactions were studied in amides and thioamides systems models, through the analysis of the electron density topology along with the Natural Bonding Orbital (NBO) approach. The effect of the dispersion terms was assessed using different DFT functionals. The NBO, independent gradient mo...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Royal Society of Chemistry
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10600513/ https://www.ncbi.nlm.nih.gov/pubmed/37901275 http://dx.doi.org/10.1039/d3ra06038a |
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author | Briceño-Vargas, Flor María Quesadas-Rojas, Mariana Mirón-López, Gumersindo Cáceres-Castillo, David Carballo, Rubén M. Mena-Rejón, Gonzalo J. Quijano-Quiñones, Ramiro F. |
author_facet | Briceño-Vargas, Flor María Quesadas-Rojas, Mariana Mirón-López, Gumersindo Cáceres-Castillo, David Carballo, Rubén M. Mena-Rejón, Gonzalo J. Quijano-Quiñones, Ramiro F. |
author_sort | Briceño-Vargas, Flor María |
collection | PubMed |
description | The n → π* interactions were studied in amides and thioamides systems models, through the analysis of the electron density topology along with the Natural Bonding Orbital (NBO) approach. The effect of the dispersion terms was assessed using different DFT functionals. The NBO, independent gradient model (IGM), and the analysis of the reduced density gradient outcomes show that dispersion forces play a significant role in the strength of n → π* interactions. The IGM results indicate that δg height values for n → π* interactions do not extend beyond 0.025. All the methods used in this work predict that n → π* interaction between pairs of thioamides is stronger than those between amides. However, the electron density topology-based methods were not able to replicate the trends in the relative force of this interaction found in the experimental and NBO results. |
format | Online Article Text |
id | pubmed-10600513 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | The Royal Society of Chemistry |
record_format | MEDLINE/PubMed |
spelling | pubmed-106005132023-10-27 Molecular orbital and topological electron density study of n → π* interactions: amides and thioamides cases Briceño-Vargas, Flor María Quesadas-Rojas, Mariana Mirón-López, Gumersindo Cáceres-Castillo, David Carballo, Rubén M. Mena-Rejón, Gonzalo J. Quijano-Quiñones, Ramiro F. RSC Adv Chemistry The n → π* interactions were studied in amides and thioamides systems models, through the analysis of the electron density topology along with the Natural Bonding Orbital (NBO) approach. The effect of the dispersion terms was assessed using different DFT functionals. The NBO, independent gradient model (IGM), and the analysis of the reduced density gradient outcomes show that dispersion forces play a significant role in the strength of n → π* interactions. The IGM results indicate that δg height values for n → π* interactions do not extend beyond 0.025. All the methods used in this work predict that n → π* interaction between pairs of thioamides is stronger than those between amides. However, the electron density topology-based methods were not able to replicate the trends in the relative force of this interaction found in the experimental and NBO results. The Royal Society of Chemistry 2023-10-26 /pmc/articles/PMC10600513/ /pubmed/37901275 http://dx.doi.org/10.1039/d3ra06038a Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by-nc/3.0/ |
spellingShingle | Chemistry Briceño-Vargas, Flor María Quesadas-Rojas, Mariana Mirón-López, Gumersindo Cáceres-Castillo, David Carballo, Rubén M. Mena-Rejón, Gonzalo J. Quijano-Quiñones, Ramiro F. Molecular orbital and topological electron density study of n → π* interactions: amides and thioamides cases |
title | Molecular orbital and topological electron density study of n → π* interactions: amides and thioamides cases |
title_full | Molecular orbital and topological electron density study of n → π* interactions: amides and thioamides cases |
title_fullStr | Molecular orbital and topological electron density study of n → π* interactions: amides and thioamides cases |
title_full_unstemmed | Molecular orbital and topological electron density study of n → π* interactions: amides and thioamides cases |
title_short | Molecular orbital and topological electron density study of n → π* interactions: amides and thioamides cases |
title_sort | molecular orbital and topological electron density study of n → π* interactions: amides and thioamides cases |
topic | Chemistry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10600513/ https://www.ncbi.nlm.nih.gov/pubmed/37901275 http://dx.doi.org/10.1039/d3ra06038a |
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