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The chromosome-level genome of Chinese praying mantis Tenodera sinensis (Mantodea: Mantidae) reveals its biology as a predator

BACKGROUND: The Chinese praying mantis, Tenodera sinensis (Saussure), is a carnivorous insect that preys on a variety of arthropods and small vertebrates, including pest species. Several studies have been conducted to understand its behavior and physiology. However, there is limited knowledge about...

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Autores principales: Yuan, Ruizhong, Zheng, Boying, Li, Zekai, Ma, Xingzhou, Shu, Xiaohan, Qu, Qiuyu, Ye, Xiqian, Li, Sheng, Tang, Pu, Chen, Xuexin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10600911/
https://www.ncbi.nlm.nih.gov/pubmed/37882605
http://dx.doi.org/10.1093/gigascience/giad090
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author Yuan, Ruizhong
Zheng, Boying
Li, Zekai
Ma, Xingzhou
Shu, Xiaohan
Qu, Qiuyu
Ye, Xiqian
Li, Sheng
Tang, Pu
Chen, Xuexin
author_facet Yuan, Ruizhong
Zheng, Boying
Li, Zekai
Ma, Xingzhou
Shu, Xiaohan
Qu, Qiuyu
Ye, Xiqian
Li, Sheng
Tang, Pu
Chen, Xuexin
author_sort Yuan, Ruizhong
collection PubMed
description BACKGROUND: The Chinese praying mantis, Tenodera sinensis (Saussure), is a carnivorous insect that preys on a variety of arthropods and small vertebrates, including pest species. Several studies have been conducted to understand its behavior and physiology. However, there is limited knowledge about the genetic information underlying its genome evolution, digestive demands, and predatory behaviors. FINDINGS: Here we have assembled the chromosome-level genome of T. sinensis, representing the first sequenced genome of the family Mantidae, with a genome size of 2.54 Gb and scaffold N50 of 174.78 Mb. Our analyses revealed that 98.6% of BUSCO genes are present, resulting in a well-annotated assembly compared to other insect genomes, containing 25,022 genes. The reconstructed phylogenetic analysis showed the expected topology placing the praying mantis in an appropriate position. Analysis of transposon elements suggested the Gypsy/Dirs family, which belongs to long terminal repeat (LTR) transposons, may be a key factor resulting in the larger genome size. The genome shows expansions in several digestion and detoxification associated gene families, including trypsin and glycosyl hydrolase (GH) genes, ATP-binding cassette (ABC) transporter, and carboxylesterase (CarE), reflecting the possible genomic basis of digestive demands. Furthermore, we have found 1 ultraviolet-sensitive opsin and 2 long-wavelength-sensitive (LWS) opsins, emphasizing the core role of LWS opsins in regulating predatory behaviors. CONCLUSIONS: The high-quality genome assembly of the praying mantis provides a valuable repository for studying the evolutionary patterns of the mantis genomes and the gene expression profiles of insect predators.
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spelling pubmed-106009112023-10-27 The chromosome-level genome of Chinese praying mantis Tenodera sinensis (Mantodea: Mantidae) reveals its biology as a predator Yuan, Ruizhong Zheng, Boying Li, Zekai Ma, Xingzhou Shu, Xiaohan Qu, Qiuyu Ye, Xiqian Li, Sheng Tang, Pu Chen, Xuexin Gigascience Data Note BACKGROUND: The Chinese praying mantis, Tenodera sinensis (Saussure), is a carnivorous insect that preys on a variety of arthropods and small vertebrates, including pest species. Several studies have been conducted to understand its behavior and physiology. However, there is limited knowledge about the genetic information underlying its genome evolution, digestive demands, and predatory behaviors. FINDINGS: Here we have assembled the chromosome-level genome of T. sinensis, representing the first sequenced genome of the family Mantidae, with a genome size of 2.54 Gb and scaffold N50 of 174.78 Mb. Our analyses revealed that 98.6% of BUSCO genes are present, resulting in a well-annotated assembly compared to other insect genomes, containing 25,022 genes. The reconstructed phylogenetic analysis showed the expected topology placing the praying mantis in an appropriate position. Analysis of transposon elements suggested the Gypsy/Dirs family, which belongs to long terminal repeat (LTR) transposons, may be a key factor resulting in the larger genome size. The genome shows expansions in several digestion and detoxification associated gene families, including trypsin and glycosyl hydrolase (GH) genes, ATP-binding cassette (ABC) transporter, and carboxylesterase (CarE), reflecting the possible genomic basis of digestive demands. Furthermore, we have found 1 ultraviolet-sensitive opsin and 2 long-wavelength-sensitive (LWS) opsins, emphasizing the core role of LWS opsins in regulating predatory behaviors. CONCLUSIONS: The high-quality genome assembly of the praying mantis provides a valuable repository for studying the evolutionary patterns of the mantis genomes and the gene expression profiles of insect predators. Oxford University Press 2023-10-26 /pmc/articles/PMC10600911/ /pubmed/37882605 http://dx.doi.org/10.1093/gigascience/giad090 Text en © The Author(s) 2023. Published by Oxford University Press GigaScience. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Data Note
Yuan, Ruizhong
Zheng, Boying
Li, Zekai
Ma, Xingzhou
Shu, Xiaohan
Qu, Qiuyu
Ye, Xiqian
Li, Sheng
Tang, Pu
Chen, Xuexin
The chromosome-level genome of Chinese praying mantis Tenodera sinensis (Mantodea: Mantidae) reveals its biology as a predator
title The chromosome-level genome of Chinese praying mantis Tenodera sinensis (Mantodea: Mantidae) reveals its biology as a predator
title_full The chromosome-level genome of Chinese praying mantis Tenodera sinensis (Mantodea: Mantidae) reveals its biology as a predator
title_fullStr The chromosome-level genome of Chinese praying mantis Tenodera sinensis (Mantodea: Mantidae) reveals its biology as a predator
title_full_unstemmed The chromosome-level genome of Chinese praying mantis Tenodera sinensis (Mantodea: Mantidae) reveals its biology as a predator
title_short The chromosome-level genome of Chinese praying mantis Tenodera sinensis (Mantodea: Mantidae) reveals its biology as a predator
title_sort chromosome-level genome of chinese praying mantis tenodera sinensis (mantodea: mantidae) reveals its biology as a predator
topic Data Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10600911/
https://www.ncbi.nlm.nih.gov/pubmed/37882605
http://dx.doi.org/10.1093/gigascience/giad090
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