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Cytological and transcriptomic analysis to unveil the mechanism of web blotch resistance in Peanut
BACKGROUND: Peanut is an important oil crop worldwide. Peanut web blotch is a fungal disease that often occurs at the same time as other leaf spot diseases, resulting in substantial leaf drop, which seriously affects the peanut yield and quality. However, the molecular mechanism underlying peanut re...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10601179/ https://www.ncbi.nlm.nih.gov/pubmed/37884908 http://dx.doi.org/10.1186/s12870-023-04545-9 |
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author | Wu, Xiaohui Sun, Ziqi Qi, Feiyan Liu, Hua Zhao, Mingbo Wang, Juan Wang, Mengmeng Zhao, Ruifang Wu, Yue Dong, Wenzhao Zheng, Zheng Zhang, Xinyou |
author_facet | Wu, Xiaohui Sun, Ziqi Qi, Feiyan Liu, Hua Zhao, Mingbo Wang, Juan Wang, Mengmeng Zhao, Ruifang Wu, Yue Dong, Wenzhao Zheng, Zheng Zhang, Xinyou |
author_sort | Wu, Xiaohui |
collection | PubMed |
description | BACKGROUND: Peanut is an important oil crop worldwide. Peanut web blotch is a fungal disease that often occurs at the same time as other leaf spot diseases, resulting in substantial leaf drop, which seriously affects the peanut yield and quality. However, the molecular mechanism underlying peanut resistance to web blotch is unknown. RESULTS: The cytological examination revealed no differences in the conidium germination rate between the web blotch-resistant variety ZH and the web blotch-susceptible variety PI at 12–48 hpi. The appressorium formation rate was significantly higher for PI than for ZH at 24 hpi. The papilla formation rate at 36 hpi and the hypersensitive response rate at 60 and 84 hpi were significantly higher for ZH than for PI. We also compared the transcriptional profiles of web blotch-infected ZH and PI plants at 0, 12, 24, 36, 48, 60, and 84 hpi using an RNA-seq technique. There were more differentially expressed genes (DEGs) in ZH and PI at 12, 36, 60, and 84 hpi than at 24 and 48 hpi. Moreover, there were more DEGs in PI than in ZH at each time-point. The analysis of metabolic pathways indicated that pantothenate and CoA biosynthesis; monobactam biosynthesis; cutin, suberine and wax biosynthesis; and ether lipid metabolism are specific to the active defense of ZH against YY187, whereas porphyrin metabolism as well as taurine and hypotaurine metabolism are pathways specifically involved in the passive defense of ZH against YY187. In the protein-protein interaction (PPI) network, most of the interacting proteins were serine acetyltransferases and cysteine synthases, which are involved in the cysteine synthesis pathway. The qRT-PCR data confirmed the reliability of the transcriptome analysis. CONCLUSION: On the basis of the PPI network for the significantly enriched genes in the pathways which were specifically enriched at different time points in ZH, we hypothesize that serine acetyltransferases and cysteine synthases are crucial for the cysteine-related resistance of peanut to web blotch. The study results provide reference material for future research on the mechanism mediating peanut web blotch resistance. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12870-023-04545-9. |
format | Online Article Text |
id | pubmed-10601179 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-106011792023-10-27 Cytological and transcriptomic analysis to unveil the mechanism of web blotch resistance in Peanut Wu, Xiaohui Sun, Ziqi Qi, Feiyan Liu, Hua Zhao, Mingbo Wang, Juan Wang, Mengmeng Zhao, Ruifang Wu, Yue Dong, Wenzhao Zheng, Zheng Zhang, Xinyou BMC Plant Biol Research BACKGROUND: Peanut is an important oil crop worldwide. Peanut web blotch is a fungal disease that often occurs at the same time as other leaf spot diseases, resulting in substantial leaf drop, which seriously affects the peanut yield and quality. However, the molecular mechanism underlying peanut resistance to web blotch is unknown. RESULTS: The cytological examination revealed no differences in the conidium germination rate between the web blotch-resistant variety ZH and the web blotch-susceptible variety PI at 12–48 hpi. The appressorium formation rate was significantly higher for PI than for ZH at 24 hpi. The papilla formation rate at 36 hpi and the hypersensitive response rate at 60 and 84 hpi were significantly higher for ZH than for PI. We also compared the transcriptional profiles of web blotch-infected ZH and PI plants at 0, 12, 24, 36, 48, 60, and 84 hpi using an RNA-seq technique. There were more differentially expressed genes (DEGs) in ZH and PI at 12, 36, 60, and 84 hpi than at 24 and 48 hpi. Moreover, there were more DEGs in PI than in ZH at each time-point. The analysis of metabolic pathways indicated that pantothenate and CoA biosynthesis; monobactam biosynthesis; cutin, suberine and wax biosynthesis; and ether lipid metabolism are specific to the active defense of ZH against YY187, whereas porphyrin metabolism as well as taurine and hypotaurine metabolism are pathways specifically involved in the passive defense of ZH against YY187. In the protein-protein interaction (PPI) network, most of the interacting proteins were serine acetyltransferases and cysteine synthases, which are involved in the cysteine synthesis pathway. The qRT-PCR data confirmed the reliability of the transcriptome analysis. CONCLUSION: On the basis of the PPI network for the significantly enriched genes in the pathways which were specifically enriched at different time points in ZH, we hypothesize that serine acetyltransferases and cysteine synthases are crucial for the cysteine-related resistance of peanut to web blotch. The study results provide reference material for future research on the mechanism mediating peanut web blotch resistance. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12870-023-04545-9. BioMed Central 2023-10-26 /pmc/articles/PMC10601179/ /pubmed/37884908 http://dx.doi.org/10.1186/s12870-023-04545-9 Text en © BioMed Central Ltd., part of Springer Nature 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Wu, Xiaohui Sun, Ziqi Qi, Feiyan Liu, Hua Zhao, Mingbo Wang, Juan Wang, Mengmeng Zhao, Ruifang Wu, Yue Dong, Wenzhao Zheng, Zheng Zhang, Xinyou Cytological and transcriptomic analysis to unveil the mechanism of web blotch resistance in Peanut |
title | Cytological and transcriptomic analysis to unveil the mechanism of web blotch resistance in Peanut |
title_full | Cytological and transcriptomic analysis to unveil the mechanism of web blotch resistance in Peanut |
title_fullStr | Cytological and transcriptomic analysis to unveil the mechanism of web blotch resistance in Peanut |
title_full_unstemmed | Cytological and transcriptomic analysis to unveil the mechanism of web blotch resistance in Peanut |
title_short | Cytological and transcriptomic analysis to unveil the mechanism of web blotch resistance in Peanut |
title_sort | cytological and transcriptomic analysis to unveil the mechanism of web blotch resistance in peanut |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10601179/ https://www.ncbi.nlm.nih.gov/pubmed/37884908 http://dx.doi.org/10.1186/s12870-023-04545-9 |
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