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Axial de-scanning using remote focusing in the detection arm of light-sheet microscopy

The ability to image at high speeds is necessary in biological imaging to capture fast-moving or transient events or to efficiently image large samples. However, due to the lack of rigidity of biological specimens, carrying out fast, high-resolution volumetric imaging without moving and agitating th...

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Autores principales: DIBAJI, HASSAN, SHOTORBAN, ALI KAZEMI NASABAN, HABIBI, MAHSA, GRATTAN, RACHEL M, LUCERO, SHAYNA, SCHODT, DAVID J., LIDKE, KEITH A., PETRUCCELLI, JONATHAN, LIDKE, DIANE S., LIU, SHENG, CHAKRABORTY, TONMOY
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Journal Experts 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10602066/
https://www.ncbi.nlm.nih.gov/pubmed/37886461
http://dx.doi.org/10.21203/rs.3.rs-3338831/v1
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author DIBAJI, HASSAN
SHOTORBAN, ALI KAZEMI NASABAN
HABIBI, MAHSA
GRATTAN, RACHEL M
LUCERO, SHAYNA
SCHODT, DAVID J.
LIDKE, KEITH A.
PETRUCCELLI, JONATHAN
LIDKE, DIANE S.
LIU, SHENG
CHAKRABORTY, TONMOY
author_facet DIBAJI, HASSAN
SHOTORBAN, ALI KAZEMI NASABAN
HABIBI, MAHSA
GRATTAN, RACHEL M
LUCERO, SHAYNA
SCHODT, DAVID J.
LIDKE, KEITH A.
PETRUCCELLI, JONATHAN
LIDKE, DIANE S.
LIU, SHENG
CHAKRABORTY, TONMOY
author_sort DIBAJI, HASSAN
collection PubMed
description The ability to image at high speeds is necessary in biological imaging to capture fast-moving or transient events or to efficiently image large samples. However, due to the lack of rigidity of biological specimens, carrying out fast, high-resolution volumetric imaging without moving and agitating the sample has been a challenging problem. Pupil-matched remote focusing has been promising for high NA imaging systems with their low aberrations and wavelength independence, making it suitable for multicolor imaging. However, owing to the incoherent and unpolarized nature of the fluorescence signal, manipulating this emission light through remote focusing is challenging. Therefore, remote focusing has been primarily limited to the illumination arm, using polarized laser light for facilitating coupling in and out of the remote focusing optics. Here we introduce a novel optical design that can de-scan the axial focus movement in the detection arm of a microscope. Our method splits the fluorescence signal into S and P-polarized light and lets them pass through the remote focusing module separately and combines them with the camera. This allows us to use only one focusing element to perform aberration-free, multi-color, volumetric imaging without (a) compromising the fluorescent signal and (b) needing to perform sample/detection-objective translation. We demonstrate the capabilities of this scheme by acquiring fast dual-color 4D (3D space + time) image stacks, with an axial range of 70 μm and camera limited acquisition speed. Owing to its general nature, we believe this technique will find its application to many other microscopy techniques that currently use an adjustable Z-stage to carry out volumetric imaging such as confocal, 2-photon, and light sheet variants.
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spelling pubmed-106020662023-10-27 Axial de-scanning using remote focusing in the detection arm of light-sheet microscopy DIBAJI, HASSAN SHOTORBAN, ALI KAZEMI NASABAN HABIBI, MAHSA GRATTAN, RACHEL M LUCERO, SHAYNA SCHODT, DAVID J. LIDKE, KEITH A. PETRUCCELLI, JONATHAN LIDKE, DIANE S. LIU, SHENG CHAKRABORTY, TONMOY Res Sq Article The ability to image at high speeds is necessary in biological imaging to capture fast-moving or transient events or to efficiently image large samples. However, due to the lack of rigidity of biological specimens, carrying out fast, high-resolution volumetric imaging without moving and agitating the sample has been a challenging problem. Pupil-matched remote focusing has been promising for high NA imaging systems with their low aberrations and wavelength independence, making it suitable for multicolor imaging. However, owing to the incoherent and unpolarized nature of the fluorescence signal, manipulating this emission light through remote focusing is challenging. Therefore, remote focusing has been primarily limited to the illumination arm, using polarized laser light for facilitating coupling in and out of the remote focusing optics. Here we introduce a novel optical design that can de-scan the axial focus movement in the detection arm of a microscope. Our method splits the fluorescence signal into S and P-polarized light and lets them pass through the remote focusing module separately and combines them with the camera. This allows us to use only one focusing element to perform aberration-free, multi-color, volumetric imaging without (a) compromising the fluorescent signal and (b) needing to perform sample/detection-objective translation. We demonstrate the capabilities of this scheme by acquiring fast dual-color 4D (3D space + time) image stacks, with an axial range of 70 μm and camera limited acquisition speed. Owing to its general nature, we believe this technique will find its application to many other microscopy techniques that currently use an adjustable Z-stage to carry out volumetric imaging such as confocal, 2-photon, and light sheet variants. American Journal Experts 2023-10-03 /pmc/articles/PMC10602066/ /pubmed/37886461 http://dx.doi.org/10.21203/rs.3.rs-3338831/v1 Text en https://creativecommons.org/licenses/by/4.0/This work is licensed under a Creative Commons Attribution 4.0 International License (https://creativecommons.org/licenses/by/4.0/) , which allows reusers to distribute, remix, adapt, and build upon the material in any medium or format, so long as attribution is given to the creator. The license allows for commercial use.
spellingShingle Article
DIBAJI, HASSAN
SHOTORBAN, ALI KAZEMI NASABAN
HABIBI, MAHSA
GRATTAN, RACHEL M
LUCERO, SHAYNA
SCHODT, DAVID J.
LIDKE, KEITH A.
PETRUCCELLI, JONATHAN
LIDKE, DIANE S.
LIU, SHENG
CHAKRABORTY, TONMOY
Axial de-scanning using remote focusing in the detection arm of light-sheet microscopy
title Axial de-scanning using remote focusing in the detection arm of light-sheet microscopy
title_full Axial de-scanning using remote focusing in the detection arm of light-sheet microscopy
title_fullStr Axial de-scanning using remote focusing in the detection arm of light-sheet microscopy
title_full_unstemmed Axial de-scanning using remote focusing in the detection arm of light-sheet microscopy
title_short Axial de-scanning using remote focusing in the detection arm of light-sheet microscopy
title_sort axial de-scanning using remote focusing in the detection arm of light-sheet microscopy
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10602066/
https://www.ncbi.nlm.nih.gov/pubmed/37886461
http://dx.doi.org/10.21203/rs.3.rs-3338831/v1
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