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Structural Insight into the Catalytic Mechanisms of an L‐Sorbosone Dehydrogenase
L‐Sorbosone dehydrogenase (SNDH) is a key enzyme involved in the biosynthesis of 2‐keto‐L‐gulonic acid , which is a direct precursor for the industrial scale production of vitamin C. Elucidating the structure and the catalytic mechanism is essential for improving SNDH performance. By solving the cry...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10602560/ https://www.ncbi.nlm.nih.gov/pubmed/37679059 http://dx.doi.org/10.1002/advs.202301955 |
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author | Li, Dong Deng, Zhiwei Hou, Xiaodong Qin, Zhijie Wang, Xinglong Yin, Dejing Chen, Yue Rao, Yijian Chen, Jian Zhou, Jingwen |
author_facet | Li, Dong Deng, Zhiwei Hou, Xiaodong Qin, Zhijie Wang, Xinglong Yin, Dejing Chen, Yue Rao, Yijian Chen, Jian Zhou, Jingwen |
author_sort | Li, Dong |
collection | PubMed |
description | L‐Sorbosone dehydrogenase (SNDH) is a key enzyme involved in the biosynthesis of 2‐keto‐L‐gulonic acid , which is a direct precursor for the industrial scale production of vitamin C. Elucidating the structure and the catalytic mechanism is essential for improving SNDH performance. By solving the crystal structures of SNDH from Gluconobacter oxydans WSH‐004, a reversible disulfide bond between Cys295 and the catalytic Cys296 residues is discovered. It allowed SNDH to switch between oxidation and reduction states, resulting in opening or closing the substrate pocket. Moreover, the Cys296 is found to affect the NADP(+) binding pose with SNDH. Combining the in vitro biochemical and site‐directed mutagenesis studies, the redox‐based dynamic regulation and the catalytic mechanisms of SNDH are proposed. Moreover, the mutants with enhanced activity are obtained by extending substrate channels. This study not only elucidates the physiological control mechanism of the dehydrogenase, but also provides a theoretical basis for engineering similar enzymes. |
format | Online Article Text |
id | pubmed-10602560 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-106025602023-10-27 Structural Insight into the Catalytic Mechanisms of an L‐Sorbosone Dehydrogenase Li, Dong Deng, Zhiwei Hou, Xiaodong Qin, Zhijie Wang, Xinglong Yin, Dejing Chen, Yue Rao, Yijian Chen, Jian Zhou, Jingwen Adv Sci (Weinh) Research Articles L‐Sorbosone dehydrogenase (SNDH) is a key enzyme involved in the biosynthesis of 2‐keto‐L‐gulonic acid , which is a direct precursor for the industrial scale production of vitamin C. Elucidating the structure and the catalytic mechanism is essential for improving SNDH performance. By solving the crystal structures of SNDH from Gluconobacter oxydans WSH‐004, a reversible disulfide bond between Cys295 and the catalytic Cys296 residues is discovered. It allowed SNDH to switch between oxidation and reduction states, resulting in opening or closing the substrate pocket. Moreover, the Cys296 is found to affect the NADP(+) binding pose with SNDH. Combining the in vitro biochemical and site‐directed mutagenesis studies, the redox‐based dynamic regulation and the catalytic mechanisms of SNDH are proposed. Moreover, the mutants with enhanced activity are obtained by extending substrate channels. This study not only elucidates the physiological control mechanism of the dehydrogenase, but also provides a theoretical basis for engineering similar enzymes. John Wiley and Sons Inc. 2023-09-07 /pmc/articles/PMC10602560/ /pubmed/37679059 http://dx.doi.org/10.1002/advs.202301955 Text en © 2023 The Authors. Advanced Science published by Wiley‐VCH GmbH https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Articles Li, Dong Deng, Zhiwei Hou, Xiaodong Qin, Zhijie Wang, Xinglong Yin, Dejing Chen, Yue Rao, Yijian Chen, Jian Zhou, Jingwen Structural Insight into the Catalytic Mechanisms of an L‐Sorbosone Dehydrogenase |
title | Structural Insight into the Catalytic Mechanisms of an L‐Sorbosone Dehydrogenase |
title_full | Structural Insight into the Catalytic Mechanisms of an L‐Sorbosone Dehydrogenase |
title_fullStr | Structural Insight into the Catalytic Mechanisms of an L‐Sorbosone Dehydrogenase |
title_full_unstemmed | Structural Insight into the Catalytic Mechanisms of an L‐Sorbosone Dehydrogenase |
title_short | Structural Insight into the Catalytic Mechanisms of an L‐Sorbosone Dehydrogenase |
title_sort | structural insight into the catalytic mechanisms of an l‐sorbosone dehydrogenase |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10602560/ https://www.ncbi.nlm.nih.gov/pubmed/37679059 http://dx.doi.org/10.1002/advs.202301955 |
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