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Prediction of short-acting beta-agonist usage in patients with asthma using temporal-convolutional neural networks
OBJECTIVE: Changes in short-acting beta-agonist (SABA) use are an important signal of asthma control and risk of asthma exacerbations. Inhaler sensors passively capture SABA use and may provide longitudinal data to identify at-riskpatients. We evaluate the performance of several ML models in predict...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10602590/ https://www.ncbi.nlm.nih.gov/pubmed/37900973 http://dx.doi.org/10.1093/jamiaopen/ooad091 |
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author | Hirons, Nicholas Allen, Angier Matsuyoshi, Noah Su, Jason Kaye, Leanne Barrett, Meredith A |
author_facet | Hirons, Nicholas Allen, Angier Matsuyoshi, Noah Su, Jason Kaye, Leanne Barrett, Meredith A |
author_sort | Hirons, Nicholas |
collection | PubMed |
description | OBJECTIVE: Changes in short-acting beta-agonist (SABA) use are an important signal of asthma control and risk of asthma exacerbations. Inhaler sensors passively capture SABA use and may provide longitudinal data to identify at-riskpatients. We evaluate the performance of several ML models in predicting daily SABA use for participants with asthma and determine relevant features for predictive accuracy. METHODS: Participants with self-reported asthma enrolled in a digital health platform (Propeller Health, WI), which included a smartphone application and inhaler sensors that collected the date and time of SABA use. Linear regression, random forests, and temporal convolutional networks (TCN) were applied to predict expected SABA puffs/person/day from SABA usage and environmental triggers. The models were compared with a simple baseline model using explained variance (R(2)), as well as using average precision (AP) and area under the receiving operator characteristic curve (ROC AUC) for predicting days with ≥1–10 puffs. RESULTS: Data included 1.2 million days of data from 13 202 participants. A TCN outperformed other models in predicting puff count (R(2) = 0.562) and day-over-day change in puff count (R(2) = 0.344). The TCN predicted days with ≥10 puffs with an ROC AUC score of 0.952 and an AP of 0.762 for predicting a day with ≥1 puffs. SABA use over the preceding 7 days had the highest feature importance, with a smaller but meaningful contribution from air pollutant features. CONCLUSION: Predicted SABA use may serve as a valuable forward-looking signal to inform early clinical intervention and self-management. Further validation with known exacerbation events is needed. |
format | Online Article Text |
id | pubmed-10602590 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-106025902023-10-27 Prediction of short-acting beta-agonist usage in patients with asthma using temporal-convolutional neural networks Hirons, Nicholas Allen, Angier Matsuyoshi, Noah Su, Jason Kaye, Leanne Barrett, Meredith A JAMIA Open Research and Applications OBJECTIVE: Changes in short-acting beta-agonist (SABA) use are an important signal of asthma control and risk of asthma exacerbations. Inhaler sensors passively capture SABA use and may provide longitudinal data to identify at-riskpatients. We evaluate the performance of several ML models in predicting daily SABA use for participants with asthma and determine relevant features for predictive accuracy. METHODS: Participants with self-reported asthma enrolled in a digital health platform (Propeller Health, WI), which included a smartphone application and inhaler sensors that collected the date and time of SABA use. Linear regression, random forests, and temporal convolutional networks (TCN) were applied to predict expected SABA puffs/person/day from SABA usage and environmental triggers. The models were compared with a simple baseline model using explained variance (R(2)), as well as using average precision (AP) and area under the receiving operator characteristic curve (ROC AUC) for predicting days with ≥1–10 puffs. RESULTS: Data included 1.2 million days of data from 13 202 participants. A TCN outperformed other models in predicting puff count (R(2) = 0.562) and day-over-day change in puff count (R(2) = 0.344). The TCN predicted days with ≥10 puffs with an ROC AUC score of 0.952 and an AP of 0.762 for predicting a day with ≥1 puffs. SABA use over the preceding 7 days had the highest feature importance, with a smaller but meaningful contribution from air pollutant features. CONCLUSION: Predicted SABA use may serve as a valuable forward-looking signal to inform early clinical intervention and self-management. Further validation with known exacerbation events is needed. Oxford University Press 2023-10-26 /pmc/articles/PMC10602590/ /pubmed/37900973 http://dx.doi.org/10.1093/jamiaopen/ooad091 Text en © The Author(s) 2023. Published by Oxford University Press on behalf of the American Medical Informatics Association. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research and Applications Hirons, Nicholas Allen, Angier Matsuyoshi, Noah Su, Jason Kaye, Leanne Barrett, Meredith A Prediction of short-acting beta-agonist usage in patients with asthma using temporal-convolutional neural networks |
title | Prediction of short-acting beta-agonist usage in patients with asthma using temporal-convolutional neural networks |
title_full | Prediction of short-acting beta-agonist usage in patients with asthma using temporal-convolutional neural networks |
title_fullStr | Prediction of short-acting beta-agonist usage in patients with asthma using temporal-convolutional neural networks |
title_full_unstemmed | Prediction of short-acting beta-agonist usage in patients with asthma using temporal-convolutional neural networks |
title_short | Prediction of short-acting beta-agonist usage in patients with asthma using temporal-convolutional neural networks |
title_sort | prediction of short-acting beta-agonist usage in patients with asthma using temporal-convolutional neural networks |
topic | Research and Applications |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10602590/ https://www.ncbi.nlm.nih.gov/pubmed/37900973 http://dx.doi.org/10.1093/jamiaopen/ooad091 |
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