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Prediction of short-acting beta-agonist usage in patients with asthma using temporal-convolutional neural networks

OBJECTIVE: Changes in short-acting beta-agonist (SABA) use are an important signal of asthma control and risk of asthma exacerbations. Inhaler sensors passively capture SABA use and may provide longitudinal data to identify at-riskpatients. We evaluate the performance of several ML models in predict...

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Autores principales: Hirons, Nicholas, Allen, Angier, Matsuyoshi, Noah, Su, Jason, Kaye, Leanne, Barrett, Meredith A
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10602590/
https://www.ncbi.nlm.nih.gov/pubmed/37900973
http://dx.doi.org/10.1093/jamiaopen/ooad091
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author Hirons, Nicholas
Allen, Angier
Matsuyoshi, Noah
Su, Jason
Kaye, Leanne
Barrett, Meredith A
author_facet Hirons, Nicholas
Allen, Angier
Matsuyoshi, Noah
Su, Jason
Kaye, Leanne
Barrett, Meredith A
author_sort Hirons, Nicholas
collection PubMed
description OBJECTIVE: Changes in short-acting beta-agonist (SABA) use are an important signal of asthma control and risk of asthma exacerbations. Inhaler sensors passively capture SABA use and may provide longitudinal data to identify at-riskpatients. We evaluate the performance of several ML models in predicting daily SABA use for participants with asthma and determine relevant features for predictive accuracy. METHODS: Participants with self-reported asthma enrolled in a digital health platform (Propeller Health, WI), which included a smartphone application and inhaler sensors that collected the date and time of SABA use. Linear regression, random forests, and temporal convolutional networks (TCN) were applied to predict expected SABA puffs/person/day from SABA usage and environmental triggers. The models were compared with a simple baseline model using explained variance (R(2)), as well as using average precision (AP) and area under the receiving operator characteristic curve (ROC AUC) for predicting days with ≥1–10 puffs. RESULTS: Data included 1.2 million days of data from 13 202 participants. A TCN outperformed other models in predicting puff count (R(2) = 0.562) and day-over-day change in puff count (R(2) = 0.344). The TCN predicted days with ≥10 puffs with an ROC AUC score of 0.952 and an AP of 0.762 for predicting a day with ≥1 puffs. SABA use over the preceding 7 days had the highest feature importance, with a smaller but meaningful contribution from air pollutant features. CONCLUSION: Predicted SABA use may serve as a valuable forward-looking signal to inform early clinical intervention and self-management. Further validation with known exacerbation events is needed.
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spelling pubmed-106025902023-10-27 Prediction of short-acting beta-agonist usage in patients with asthma using temporal-convolutional neural networks Hirons, Nicholas Allen, Angier Matsuyoshi, Noah Su, Jason Kaye, Leanne Barrett, Meredith A JAMIA Open Research and Applications OBJECTIVE: Changes in short-acting beta-agonist (SABA) use are an important signal of asthma control and risk of asthma exacerbations. Inhaler sensors passively capture SABA use and may provide longitudinal data to identify at-riskpatients. We evaluate the performance of several ML models in predicting daily SABA use for participants with asthma and determine relevant features for predictive accuracy. METHODS: Participants with self-reported asthma enrolled in a digital health platform (Propeller Health, WI), which included a smartphone application and inhaler sensors that collected the date and time of SABA use. Linear regression, random forests, and temporal convolutional networks (TCN) were applied to predict expected SABA puffs/person/day from SABA usage and environmental triggers. The models were compared with a simple baseline model using explained variance (R(2)), as well as using average precision (AP) and area under the receiving operator characteristic curve (ROC AUC) for predicting days with ≥1–10 puffs. RESULTS: Data included 1.2 million days of data from 13 202 participants. A TCN outperformed other models in predicting puff count (R(2) = 0.562) and day-over-day change in puff count (R(2) = 0.344). The TCN predicted days with ≥10 puffs with an ROC AUC score of 0.952 and an AP of 0.762 for predicting a day with ≥1 puffs. SABA use over the preceding 7 days had the highest feature importance, with a smaller but meaningful contribution from air pollutant features. CONCLUSION: Predicted SABA use may serve as a valuable forward-looking signal to inform early clinical intervention and self-management. Further validation with known exacerbation events is needed. Oxford University Press 2023-10-26 /pmc/articles/PMC10602590/ /pubmed/37900973 http://dx.doi.org/10.1093/jamiaopen/ooad091 Text en © The Author(s) 2023. Published by Oxford University Press on behalf of the American Medical Informatics Association. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research and Applications
Hirons, Nicholas
Allen, Angier
Matsuyoshi, Noah
Su, Jason
Kaye, Leanne
Barrett, Meredith A
Prediction of short-acting beta-agonist usage in patients with asthma using temporal-convolutional neural networks
title Prediction of short-acting beta-agonist usage in patients with asthma using temporal-convolutional neural networks
title_full Prediction of short-acting beta-agonist usage in patients with asthma using temporal-convolutional neural networks
title_fullStr Prediction of short-acting beta-agonist usage in patients with asthma using temporal-convolutional neural networks
title_full_unstemmed Prediction of short-acting beta-agonist usage in patients with asthma using temporal-convolutional neural networks
title_short Prediction of short-acting beta-agonist usage in patients with asthma using temporal-convolutional neural networks
title_sort prediction of short-acting beta-agonist usage in patients with asthma using temporal-convolutional neural networks
topic Research and Applications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10602590/
https://www.ncbi.nlm.nih.gov/pubmed/37900973
http://dx.doi.org/10.1093/jamiaopen/ooad091
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