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Hs1Cas12a and Ev1Cas12a confer efficient genome editing in plants

Cas12a, also known as Cpf1, is a highly versatile CRISPR-Cas enzyme that has been widely used in genome editing. Unlike its well-known counterpart, Cas9, Cas12a has unique features that make it a highly efficient genome editing tool at AT-rich genomic regions. To enrich the CRISPR-Cas12a plant genom...

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Autores principales: Li, Gen, Zhang, Yingxiao, Dailey, Micah, Qi, Yiping
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10602648/
https://www.ncbi.nlm.nih.gov/pubmed/37901282
http://dx.doi.org/10.3389/fgeed.2023.1251903
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author Li, Gen
Zhang, Yingxiao
Dailey, Micah
Qi, Yiping
author_facet Li, Gen
Zhang, Yingxiao
Dailey, Micah
Qi, Yiping
author_sort Li, Gen
collection PubMed
description Cas12a, also known as Cpf1, is a highly versatile CRISPR-Cas enzyme that has been widely used in genome editing. Unlike its well-known counterpart, Cas9, Cas12a has unique features that make it a highly efficient genome editing tool at AT-rich genomic regions. To enrich the CRISPR-Cas12a plant genome editing toolbox, we explored 17 novel Cas12a orthologs for their genome editing capabilities in plants. Out of them, Ev1Cas12a and Hs1Cas12a showed efficient multiplexed genome editing in rice and tomato protoplasts. Notably, Hs1Cas12a exhibited greater tolerance to lower temperatures. Moreover, Hs1Cas12a generated up to 87.5% biallelic editing in rice T(0) plants. Both Ev1Cas12a and Hs1Cas12a achieved effective editing in poplar T(0) plants, with up to 100% of plants edited, albeit with high chimerism. Taken together, the efficient genome editing demonstrated by Ev1Cas12a and Hs1Cas12a in both monocot and dicot plants highlights their potential as promising genome editing tools in plant species and beyond.
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spelling pubmed-106026482023-10-27 Hs1Cas12a and Ev1Cas12a confer efficient genome editing in plants Li, Gen Zhang, Yingxiao Dailey, Micah Qi, Yiping Front Genome Ed Genome Editing Cas12a, also known as Cpf1, is a highly versatile CRISPR-Cas enzyme that has been widely used in genome editing. Unlike its well-known counterpart, Cas9, Cas12a has unique features that make it a highly efficient genome editing tool at AT-rich genomic regions. To enrich the CRISPR-Cas12a plant genome editing toolbox, we explored 17 novel Cas12a orthologs for their genome editing capabilities in plants. Out of them, Ev1Cas12a and Hs1Cas12a showed efficient multiplexed genome editing in rice and tomato protoplasts. Notably, Hs1Cas12a exhibited greater tolerance to lower temperatures. Moreover, Hs1Cas12a generated up to 87.5% biallelic editing in rice T(0) plants. Both Ev1Cas12a and Hs1Cas12a achieved effective editing in poplar T(0) plants, with up to 100% of plants edited, albeit with high chimerism. Taken together, the efficient genome editing demonstrated by Ev1Cas12a and Hs1Cas12a in both monocot and dicot plants highlights their potential as promising genome editing tools in plant species and beyond. Frontiers Media S.A. 2023-10-12 /pmc/articles/PMC10602648/ /pubmed/37901282 http://dx.doi.org/10.3389/fgeed.2023.1251903 Text en Copyright © 2023 Li, Zhang, Dailey and Qi. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Genome Editing
Li, Gen
Zhang, Yingxiao
Dailey, Micah
Qi, Yiping
Hs1Cas12a and Ev1Cas12a confer efficient genome editing in plants
title Hs1Cas12a and Ev1Cas12a confer efficient genome editing in plants
title_full Hs1Cas12a and Ev1Cas12a confer efficient genome editing in plants
title_fullStr Hs1Cas12a and Ev1Cas12a confer efficient genome editing in plants
title_full_unstemmed Hs1Cas12a and Ev1Cas12a confer efficient genome editing in plants
title_short Hs1Cas12a and Ev1Cas12a confer efficient genome editing in plants
title_sort hs1cas12a and ev1cas12a confer efficient genome editing in plants
topic Genome Editing
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10602648/
https://www.ncbi.nlm.nih.gov/pubmed/37901282
http://dx.doi.org/10.3389/fgeed.2023.1251903
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