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Deep learning, radiomics and radiogenomics applications in the digital breast tomosynthesis: a systematic review

BACKGROUND: Recent advancements in computing power and state-of-the-art algorithms have helped in more accessible and accurate diagnosis of numerous diseases. In addition, the development of de novo areas in imaging science, such as radiomics and radiogenomics, have been adding more to personalize h...

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Autores principales: Hussain, Sadam, Lafarga-Osuna, Yareth, Ali, Mansoor, Naseem, Usman, Ahmed, Masroor, Tamez-Peña, Jose Gerardo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10605943/
https://www.ncbi.nlm.nih.gov/pubmed/37884877
http://dx.doi.org/10.1186/s12859-023-05515-6
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author Hussain, Sadam
Lafarga-Osuna, Yareth
Ali, Mansoor
Naseem, Usman
Ahmed, Masroor
Tamez-Peña, Jose Gerardo
author_facet Hussain, Sadam
Lafarga-Osuna, Yareth
Ali, Mansoor
Naseem, Usman
Ahmed, Masroor
Tamez-Peña, Jose Gerardo
author_sort Hussain, Sadam
collection PubMed
description BACKGROUND: Recent advancements in computing power and state-of-the-art algorithms have helped in more accessible and accurate diagnosis of numerous diseases. In addition, the development of de novo areas in imaging science, such as radiomics and radiogenomics, have been adding more to personalize healthcare to stratify patients better. These techniques associate imaging phenotypes with the related disease genes. Various imaging modalities have been used for years to diagnose breast cancer. Nonetheless, digital breast tomosynthesis (DBT), a state-of-the-art technique, has produced promising results comparatively. DBT, a 3D mammography, is replacing conventional 2D mammography rapidly. This technological advancement is key to AI algorithms for accurately interpreting medical images. OBJECTIVE AND METHODS: This paper presents a comprehensive review of deep learning (DL), radiomics and radiogenomics in breast image analysis. This review focuses on DBT, its extracted synthetic mammography (SM), and full-field digital mammography (FFDM). Furthermore, this survey provides systematic knowledge about DL, radiomics, and radiogenomics for beginners and advanced-level researchers. RESULTS: A total of 500 articles were identified, with 30 studies included as the set criteria. Parallel benchmarking of radiomics, radiogenomics, and DL models applied to the DBT images could allow clinicians and researchers alike to have greater awareness as they consider clinical deployment or development of new models. This review provides a comprehensive guide to understanding the current state of early breast cancer detection using DBT images. CONCLUSION: Using this survey, investigators with various backgrounds can easily seek interdisciplinary science and new DL, radiomics, and radiogenomics directions towards DBT.
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spelling pubmed-106059432023-10-28 Deep learning, radiomics and radiogenomics applications in the digital breast tomosynthesis: a systematic review Hussain, Sadam Lafarga-Osuna, Yareth Ali, Mansoor Naseem, Usman Ahmed, Masroor Tamez-Peña, Jose Gerardo BMC Bioinformatics Research BACKGROUND: Recent advancements in computing power and state-of-the-art algorithms have helped in more accessible and accurate diagnosis of numerous diseases. In addition, the development of de novo areas in imaging science, such as radiomics and radiogenomics, have been adding more to personalize healthcare to stratify patients better. These techniques associate imaging phenotypes with the related disease genes. Various imaging modalities have been used for years to diagnose breast cancer. Nonetheless, digital breast tomosynthesis (DBT), a state-of-the-art technique, has produced promising results comparatively. DBT, a 3D mammography, is replacing conventional 2D mammography rapidly. This technological advancement is key to AI algorithms for accurately interpreting medical images. OBJECTIVE AND METHODS: This paper presents a comprehensive review of deep learning (DL), radiomics and radiogenomics in breast image analysis. This review focuses on DBT, its extracted synthetic mammography (SM), and full-field digital mammography (FFDM). Furthermore, this survey provides systematic knowledge about DL, radiomics, and radiogenomics for beginners and advanced-level researchers. RESULTS: A total of 500 articles were identified, with 30 studies included as the set criteria. Parallel benchmarking of radiomics, radiogenomics, and DL models applied to the DBT images could allow clinicians and researchers alike to have greater awareness as they consider clinical deployment or development of new models. This review provides a comprehensive guide to understanding the current state of early breast cancer detection using DBT images. CONCLUSION: Using this survey, investigators with various backgrounds can easily seek interdisciplinary science and new DL, radiomics, and radiogenomics directions towards DBT. BioMed Central 2023-10-26 /pmc/articles/PMC10605943/ /pubmed/37884877 http://dx.doi.org/10.1186/s12859-023-05515-6 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Hussain, Sadam
Lafarga-Osuna, Yareth
Ali, Mansoor
Naseem, Usman
Ahmed, Masroor
Tamez-Peña, Jose Gerardo
Deep learning, radiomics and radiogenomics applications in the digital breast tomosynthesis: a systematic review
title Deep learning, radiomics and radiogenomics applications in the digital breast tomosynthesis: a systematic review
title_full Deep learning, radiomics and radiogenomics applications in the digital breast tomosynthesis: a systematic review
title_fullStr Deep learning, radiomics and radiogenomics applications in the digital breast tomosynthesis: a systematic review
title_full_unstemmed Deep learning, radiomics and radiogenomics applications in the digital breast tomosynthesis: a systematic review
title_short Deep learning, radiomics and radiogenomics applications in the digital breast tomosynthesis: a systematic review
title_sort deep learning, radiomics and radiogenomics applications in the digital breast tomosynthesis: a systematic review
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10605943/
https://www.ncbi.nlm.nih.gov/pubmed/37884877
http://dx.doi.org/10.1186/s12859-023-05515-6
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