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Quantifying Soil Complexity Using Fisher Shannon Method on 3D X-ray Computed Tomography Scans

The conversion of native forest into agricultural land, which is common in many parts of the world, poses important questions regarding soil degradation, demanding further efforts to better understand the effect of land use change on soil functions. With the advent of 3D computed tomography techniqu...

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Autores principales: Aguiar, Domingos, Menezes, Rômulo Simões Cezar, Antonino, Antonio Celso Dantas, Stosic, Tatijana, Tarquis, Ana M., Stosic, Borko
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10606068/
https://www.ncbi.nlm.nih.gov/pubmed/37895586
http://dx.doi.org/10.3390/e25101465
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author Aguiar, Domingos
Menezes, Rômulo Simões Cezar
Antonino, Antonio Celso Dantas
Stosic, Tatijana
Tarquis, Ana M.
Stosic, Borko
author_facet Aguiar, Domingos
Menezes, Rômulo Simões Cezar
Antonino, Antonio Celso Dantas
Stosic, Tatijana
Tarquis, Ana M.
Stosic, Borko
author_sort Aguiar, Domingos
collection PubMed
description The conversion of native forest into agricultural land, which is common in many parts of the world, poses important questions regarding soil degradation, demanding further efforts to better understand the effect of land use change on soil functions. With the advent of 3D computed tomography techniques and computing power, new methods are becoming available to address this question. In this direction, in the current work we implement a modification of the Fisher–Shannon method, borrowed from information theory, to quantify the complexity of twelve 3D CT soil samples from a sugarcane plantation and twelve samples from a nearby native Atlantic forest in northeastern Brazil. The distinction found between the samples from the sugar plantation and the Atlantic forest site is quite pronounced. The results at the level of 91.7% accuracy were obtained considering the complexity in the Fisher–Shannon plane. Atlantic forest samples are found to be generally more complex than those from the sugar plantation.
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spelling pubmed-106060682023-10-28 Quantifying Soil Complexity Using Fisher Shannon Method on 3D X-ray Computed Tomography Scans Aguiar, Domingos Menezes, Rômulo Simões Cezar Antonino, Antonio Celso Dantas Stosic, Tatijana Tarquis, Ana M. Stosic, Borko Entropy (Basel) Article The conversion of native forest into agricultural land, which is common in many parts of the world, poses important questions regarding soil degradation, demanding further efforts to better understand the effect of land use change on soil functions. With the advent of 3D computed tomography techniques and computing power, new methods are becoming available to address this question. In this direction, in the current work we implement a modification of the Fisher–Shannon method, borrowed from information theory, to quantify the complexity of twelve 3D CT soil samples from a sugarcane plantation and twelve samples from a nearby native Atlantic forest in northeastern Brazil. The distinction found between the samples from the sugar plantation and the Atlantic forest site is quite pronounced. The results at the level of 91.7% accuracy were obtained considering the complexity in the Fisher–Shannon plane. Atlantic forest samples are found to be generally more complex than those from the sugar plantation. MDPI 2023-10-19 /pmc/articles/PMC10606068/ /pubmed/37895586 http://dx.doi.org/10.3390/e25101465 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Aguiar, Domingos
Menezes, Rômulo Simões Cezar
Antonino, Antonio Celso Dantas
Stosic, Tatijana
Tarquis, Ana M.
Stosic, Borko
Quantifying Soil Complexity Using Fisher Shannon Method on 3D X-ray Computed Tomography Scans
title Quantifying Soil Complexity Using Fisher Shannon Method on 3D X-ray Computed Tomography Scans
title_full Quantifying Soil Complexity Using Fisher Shannon Method on 3D X-ray Computed Tomography Scans
title_fullStr Quantifying Soil Complexity Using Fisher Shannon Method on 3D X-ray Computed Tomography Scans
title_full_unstemmed Quantifying Soil Complexity Using Fisher Shannon Method on 3D X-ray Computed Tomography Scans
title_short Quantifying Soil Complexity Using Fisher Shannon Method on 3D X-ray Computed Tomography Scans
title_sort quantifying soil complexity using fisher shannon method on 3d x-ray computed tomography scans
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10606068/
https://www.ncbi.nlm.nih.gov/pubmed/37895586
http://dx.doi.org/10.3390/e25101465
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