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Distance-Metric Learning for Personalized Survival Analysis

Personalized time-to-event or survival prediction with right-censored outcomes is a pervasive challenge in healthcare research. Although various supervised machine learning methods, such as random survival forests or neural networks, have been adapted to handle such outcomes effectively, they do not...

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Autores principales: Galetzka, Wolfgang, Kowall, Bernd, Jusi, Cynthia, Huessler, Eva-Maria, Stang, Andreas
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10606222/
https://www.ncbi.nlm.nih.gov/pubmed/37895525
http://dx.doi.org/10.3390/e25101404
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author Galetzka, Wolfgang
Kowall, Bernd
Jusi, Cynthia
Huessler, Eva-Maria
Stang, Andreas
author_facet Galetzka, Wolfgang
Kowall, Bernd
Jusi, Cynthia
Huessler, Eva-Maria
Stang, Andreas
author_sort Galetzka, Wolfgang
collection PubMed
description Personalized time-to-event or survival prediction with right-censored outcomes is a pervasive challenge in healthcare research. Although various supervised machine learning methods, such as random survival forests or neural networks, have been adapted to handle such outcomes effectively, they do not provide explanations for their predictions, lacking interpretability. In this paper, an alternative method for survival prediction by weighted nearest neighbors is proposed. Fitting this model to data entails optimizing the weights by learning a metric. An individual prediction of this method can be explained by providing the user with the most influential data points for this prediction, i.e., the closest data points and their weights. The strengths and weaknesses in terms of predictive performance are highlighted on simulated data and an application of the method on two different real-world datasets of breast cancer patients shows its competitiveness with established methods.
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spelling pubmed-106062222023-10-28 Distance-Metric Learning for Personalized Survival Analysis Galetzka, Wolfgang Kowall, Bernd Jusi, Cynthia Huessler, Eva-Maria Stang, Andreas Entropy (Basel) Article Personalized time-to-event or survival prediction with right-censored outcomes is a pervasive challenge in healthcare research. Although various supervised machine learning methods, such as random survival forests or neural networks, have been adapted to handle such outcomes effectively, they do not provide explanations for their predictions, lacking interpretability. In this paper, an alternative method for survival prediction by weighted nearest neighbors is proposed. Fitting this model to data entails optimizing the weights by learning a metric. An individual prediction of this method can be explained by providing the user with the most influential data points for this prediction, i.e., the closest data points and their weights. The strengths and weaknesses in terms of predictive performance are highlighted on simulated data and an application of the method on two different real-world datasets of breast cancer patients shows its competitiveness with established methods. MDPI 2023-09-30 /pmc/articles/PMC10606222/ /pubmed/37895525 http://dx.doi.org/10.3390/e25101404 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Galetzka, Wolfgang
Kowall, Bernd
Jusi, Cynthia
Huessler, Eva-Maria
Stang, Andreas
Distance-Metric Learning for Personalized Survival Analysis
title Distance-Metric Learning for Personalized Survival Analysis
title_full Distance-Metric Learning for Personalized Survival Analysis
title_fullStr Distance-Metric Learning for Personalized Survival Analysis
title_full_unstemmed Distance-Metric Learning for Personalized Survival Analysis
title_short Distance-Metric Learning for Personalized Survival Analysis
title_sort distance-metric learning for personalized survival analysis
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10606222/
https://www.ncbi.nlm.nih.gov/pubmed/37895525
http://dx.doi.org/10.3390/e25101404
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