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Radiogenomic Features of GIMAP Family Genes in Clear Cell Renal Cell Carcinoma: An Observational Study on CT Images

GTPases of immunity-associated proteins (GIMAP) genes include seven functional genes and a pseudogene. Most of the GIMAPs have a role in the maintenance and development of lymphocytes. GIMAPs could inhibit the development of tumors by increasing the amount and antitumor activity of infiltrating immu...

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Autores principales: Greco, Federico, Panunzio, Andrea, Tafuri, Alessandro, Bernetti, Caterina, Pagliarulo, Vincenzo, Beomonte Zobel, Bruno, Scardapane, Arnaldo, Mallio, Carlo Augusto
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10606653/
https://www.ncbi.nlm.nih.gov/pubmed/37895181
http://dx.doi.org/10.3390/genes14101832
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author Greco, Federico
Panunzio, Andrea
Tafuri, Alessandro
Bernetti, Caterina
Pagliarulo, Vincenzo
Beomonte Zobel, Bruno
Scardapane, Arnaldo
Mallio, Carlo Augusto
author_facet Greco, Federico
Panunzio, Andrea
Tafuri, Alessandro
Bernetti, Caterina
Pagliarulo, Vincenzo
Beomonte Zobel, Bruno
Scardapane, Arnaldo
Mallio, Carlo Augusto
author_sort Greco, Federico
collection PubMed
description GTPases of immunity-associated proteins (GIMAP) genes include seven functional genes and a pseudogene. Most of the GIMAPs have a role in the maintenance and development of lymphocytes. GIMAPs could inhibit the development of tumors by increasing the amount and antitumor activity of infiltrating immunocytes. Knowledge of key factors that affect the tumor immune microenvironment for predicting the efficacy of immunotherapy and establishing new targets in ccRCC is of great importance. A computed tomography (CT)-based radiogenomic approach was used to detect the imaging phenotypic features of GIMAP family gene expression in ccRCC. In this retrospective study we enrolled 193 ccRCC patients divided into two groups: ccRCC patients with GIMAP expression (n = 52) and ccRCC patients without GIMAP expression (n = 141). Several imaging features were evaluated on preoperative CT scan. A statistically significant correlation was found with absence of endophytic growth pattern (p = 0.049), tumor infiltration (p = 0.005), advanced age (p = 0.018), and high Fuhrman grade (p = 0.024). This study demonstrates CT imaging features of GIMAP expression in ccRCC. These results could allow the collection of data on GIMAP expression through a CT-approach and could be used for the development of a targeted therapy.
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spelling pubmed-106066532023-10-28 Radiogenomic Features of GIMAP Family Genes in Clear Cell Renal Cell Carcinoma: An Observational Study on CT Images Greco, Federico Panunzio, Andrea Tafuri, Alessandro Bernetti, Caterina Pagliarulo, Vincenzo Beomonte Zobel, Bruno Scardapane, Arnaldo Mallio, Carlo Augusto Genes (Basel) Article GTPases of immunity-associated proteins (GIMAP) genes include seven functional genes and a pseudogene. Most of the GIMAPs have a role in the maintenance and development of lymphocytes. GIMAPs could inhibit the development of tumors by increasing the amount and antitumor activity of infiltrating immunocytes. Knowledge of key factors that affect the tumor immune microenvironment for predicting the efficacy of immunotherapy and establishing new targets in ccRCC is of great importance. A computed tomography (CT)-based radiogenomic approach was used to detect the imaging phenotypic features of GIMAP family gene expression in ccRCC. In this retrospective study we enrolled 193 ccRCC patients divided into two groups: ccRCC patients with GIMAP expression (n = 52) and ccRCC patients without GIMAP expression (n = 141). Several imaging features were evaluated on preoperative CT scan. A statistically significant correlation was found with absence of endophytic growth pattern (p = 0.049), tumor infiltration (p = 0.005), advanced age (p = 0.018), and high Fuhrman grade (p = 0.024). This study demonstrates CT imaging features of GIMAP expression in ccRCC. These results could allow the collection of data on GIMAP expression through a CT-approach and could be used for the development of a targeted therapy. MDPI 2023-09-22 /pmc/articles/PMC10606653/ /pubmed/37895181 http://dx.doi.org/10.3390/genes14101832 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Greco, Federico
Panunzio, Andrea
Tafuri, Alessandro
Bernetti, Caterina
Pagliarulo, Vincenzo
Beomonte Zobel, Bruno
Scardapane, Arnaldo
Mallio, Carlo Augusto
Radiogenomic Features of GIMAP Family Genes in Clear Cell Renal Cell Carcinoma: An Observational Study on CT Images
title Radiogenomic Features of GIMAP Family Genes in Clear Cell Renal Cell Carcinoma: An Observational Study on CT Images
title_full Radiogenomic Features of GIMAP Family Genes in Clear Cell Renal Cell Carcinoma: An Observational Study on CT Images
title_fullStr Radiogenomic Features of GIMAP Family Genes in Clear Cell Renal Cell Carcinoma: An Observational Study on CT Images
title_full_unstemmed Radiogenomic Features of GIMAP Family Genes in Clear Cell Renal Cell Carcinoma: An Observational Study on CT Images
title_short Radiogenomic Features of GIMAP Family Genes in Clear Cell Renal Cell Carcinoma: An Observational Study on CT Images
title_sort radiogenomic features of gimap family genes in clear cell renal cell carcinoma: an observational study on ct images
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10606653/
https://www.ncbi.nlm.nih.gov/pubmed/37895181
http://dx.doi.org/10.3390/genes14101832
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