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The Time-Resolved Salt Stress Response of Dunaliella tertiolecta—A Comprehensive System Biology Perspective
Algae-driven processes, such as direct CO(2) fixation into glycerol, provide new routes for sustainable chemical production in synergy with greenhouse gas mitigation. The marine microalgae Dunaliella tertiolecta is reported to accumulate high amounts of intracellular glycerol upon exposure to high s...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10607294/ https://www.ncbi.nlm.nih.gov/pubmed/37895054 http://dx.doi.org/10.3390/ijms242015374 |
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author | Keil, Linda Mehlmer, Norbert Cavelius, Philipp Garbe, Daniel Haack, Martina Ritz, Manfred Awad, Dania Brück, Thomas |
author_facet | Keil, Linda Mehlmer, Norbert Cavelius, Philipp Garbe, Daniel Haack, Martina Ritz, Manfred Awad, Dania Brück, Thomas |
author_sort | Keil, Linda |
collection | PubMed |
description | Algae-driven processes, such as direct CO(2) fixation into glycerol, provide new routes for sustainable chemical production in synergy with greenhouse gas mitigation. The marine microalgae Dunaliella tertiolecta is reported to accumulate high amounts of intracellular glycerol upon exposure to high salt concentrations. We have conducted a comprehensive, time-resolved systems biology study to decipher the metabolic response of D. tertiolecta up to 24 h under continuous light conditions. Initially, due to a lack of reference sequences required for MS/MS-based protein identification, a high-quality draft genome of D. tertiolecta was generated. Subsequently, a database was designed by combining the genome with transcriptome data obtained before and after salt stress. This database allowed for detection of differentially expressed proteins and identification of phosphorylated proteins, which are involved in the short- and long-term adaptation to salt stress, respectively. Specifically, in the rapid salt adaptation response, proteins linked to the Ca(2+) signaling pathway and ion channel proteins were significantly increased. While phosphorylation is key in maintaining ion homeostasis during the rapid adaptation to salt stress, phosphofructokinase is required for long-term adaption. Lacking β-carotene, synthesis under salt stress conditions might be substituted by the redox-sensitive protein CP12. Furthermore, salt stress induces upregulation of Calvin–Benson cycle-related proteins. |
format | Online Article Text |
id | pubmed-10607294 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-106072942023-10-28 The Time-Resolved Salt Stress Response of Dunaliella tertiolecta—A Comprehensive System Biology Perspective Keil, Linda Mehlmer, Norbert Cavelius, Philipp Garbe, Daniel Haack, Martina Ritz, Manfred Awad, Dania Brück, Thomas Int J Mol Sci Article Algae-driven processes, such as direct CO(2) fixation into glycerol, provide new routes for sustainable chemical production in synergy with greenhouse gas mitigation. The marine microalgae Dunaliella tertiolecta is reported to accumulate high amounts of intracellular glycerol upon exposure to high salt concentrations. We have conducted a comprehensive, time-resolved systems biology study to decipher the metabolic response of D. tertiolecta up to 24 h under continuous light conditions. Initially, due to a lack of reference sequences required for MS/MS-based protein identification, a high-quality draft genome of D. tertiolecta was generated. Subsequently, a database was designed by combining the genome with transcriptome data obtained before and after salt stress. This database allowed for detection of differentially expressed proteins and identification of phosphorylated proteins, which are involved in the short- and long-term adaptation to salt stress, respectively. Specifically, in the rapid salt adaptation response, proteins linked to the Ca(2+) signaling pathway and ion channel proteins were significantly increased. While phosphorylation is key in maintaining ion homeostasis during the rapid adaptation to salt stress, phosphofructokinase is required for long-term adaption. Lacking β-carotene, synthesis under salt stress conditions might be substituted by the redox-sensitive protein CP12. Furthermore, salt stress induces upregulation of Calvin–Benson cycle-related proteins. MDPI 2023-10-19 /pmc/articles/PMC10607294/ /pubmed/37895054 http://dx.doi.org/10.3390/ijms242015374 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Keil, Linda Mehlmer, Norbert Cavelius, Philipp Garbe, Daniel Haack, Martina Ritz, Manfred Awad, Dania Brück, Thomas The Time-Resolved Salt Stress Response of Dunaliella tertiolecta—A Comprehensive System Biology Perspective |
title | The Time-Resolved Salt Stress Response of Dunaliella tertiolecta—A Comprehensive System Biology Perspective |
title_full | The Time-Resolved Salt Stress Response of Dunaliella tertiolecta—A Comprehensive System Biology Perspective |
title_fullStr | The Time-Resolved Salt Stress Response of Dunaliella tertiolecta—A Comprehensive System Biology Perspective |
title_full_unstemmed | The Time-Resolved Salt Stress Response of Dunaliella tertiolecta—A Comprehensive System Biology Perspective |
title_short | The Time-Resolved Salt Stress Response of Dunaliella tertiolecta—A Comprehensive System Biology Perspective |
title_sort | time-resolved salt stress response of dunaliella tertiolecta—a comprehensive system biology perspective |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10607294/ https://www.ncbi.nlm.nih.gov/pubmed/37895054 http://dx.doi.org/10.3390/ijms242015374 |
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