Cargando…

The Time-Resolved Salt Stress Response of Dunaliella tertiolecta—A Comprehensive System Biology Perspective

Algae-driven processes, such as direct CO(2) fixation into glycerol, provide new routes for sustainable chemical production in synergy with greenhouse gas mitigation. The marine microalgae Dunaliella tertiolecta is reported to accumulate high amounts of intracellular glycerol upon exposure to high s...

Descripción completa

Detalles Bibliográficos
Autores principales: Keil, Linda, Mehlmer, Norbert, Cavelius, Philipp, Garbe, Daniel, Haack, Martina, Ritz, Manfred, Awad, Dania, Brück, Thomas
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10607294/
https://www.ncbi.nlm.nih.gov/pubmed/37895054
http://dx.doi.org/10.3390/ijms242015374
_version_ 1785127511880892416
author Keil, Linda
Mehlmer, Norbert
Cavelius, Philipp
Garbe, Daniel
Haack, Martina
Ritz, Manfred
Awad, Dania
Brück, Thomas
author_facet Keil, Linda
Mehlmer, Norbert
Cavelius, Philipp
Garbe, Daniel
Haack, Martina
Ritz, Manfred
Awad, Dania
Brück, Thomas
author_sort Keil, Linda
collection PubMed
description Algae-driven processes, such as direct CO(2) fixation into glycerol, provide new routes for sustainable chemical production in synergy with greenhouse gas mitigation. The marine microalgae Dunaliella tertiolecta is reported to accumulate high amounts of intracellular glycerol upon exposure to high salt concentrations. We have conducted a comprehensive, time-resolved systems biology study to decipher the metabolic response of D. tertiolecta up to 24 h under continuous light conditions. Initially, due to a lack of reference sequences required for MS/MS-based protein identification, a high-quality draft genome of D. tertiolecta was generated. Subsequently, a database was designed by combining the genome with transcriptome data obtained before and after salt stress. This database allowed for detection of differentially expressed proteins and identification of phosphorylated proteins, which are involved in the short- and long-term adaptation to salt stress, respectively. Specifically, in the rapid salt adaptation response, proteins linked to the Ca(2+) signaling pathway and ion channel proteins were significantly increased. While phosphorylation is key in maintaining ion homeostasis during the rapid adaptation to salt stress, phosphofructokinase is required for long-term adaption. Lacking β-carotene, synthesis under salt stress conditions might be substituted by the redox-sensitive protein CP12. Furthermore, salt stress induces upregulation of Calvin–Benson cycle-related proteins.
format Online
Article
Text
id pubmed-10607294
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-106072942023-10-28 The Time-Resolved Salt Stress Response of Dunaliella tertiolecta—A Comprehensive System Biology Perspective Keil, Linda Mehlmer, Norbert Cavelius, Philipp Garbe, Daniel Haack, Martina Ritz, Manfred Awad, Dania Brück, Thomas Int J Mol Sci Article Algae-driven processes, such as direct CO(2) fixation into glycerol, provide new routes for sustainable chemical production in synergy with greenhouse gas mitigation. The marine microalgae Dunaliella tertiolecta is reported to accumulate high amounts of intracellular glycerol upon exposure to high salt concentrations. We have conducted a comprehensive, time-resolved systems biology study to decipher the metabolic response of D. tertiolecta up to 24 h under continuous light conditions. Initially, due to a lack of reference sequences required for MS/MS-based protein identification, a high-quality draft genome of D. tertiolecta was generated. Subsequently, a database was designed by combining the genome with transcriptome data obtained before and after salt stress. This database allowed for detection of differentially expressed proteins and identification of phosphorylated proteins, which are involved in the short- and long-term adaptation to salt stress, respectively. Specifically, in the rapid salt adaptation response, proteins linked to the Ca(2+) signaling pathway and ion channel proteins were significantly increased. While phosphorylation is key in maintaining ion homeostasis during the rapid adaptation to salt stress, phosphofructokinase is required for long-term adaption. Lacking β-carotene, synthesis under salt stress conditions might be substituted by the redox-sensitive protein CP12. Furthermore, salt stress induces upregulation of Calvin–Benson cycle-related proteins. MDPI 2023-10-19 /pmc/articles/PMC10607294/ /pubmed/37895054 http://dx.doi.org/10.3390/ijms242015374 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Keil, Linda
Mehlmer, Norbert
Cavelius, Philipp
Garbe, Daniel
Haack, Martina
Ritz, Manfred
Awad, Dania
Brück, Thomas
The Time-Resolved Salt Stress Response of Dunaliella tertiolecta—A Comprehensive System Biology Perspective
title The Time-Resolved Salt Stress Response of Dunaliella tertiolecta—A Comprehensive System Biology Perspective
title_full The Time-Resolved Salt Stress Response of Dunaliella tertiolecta—A Comprehensive System Biology Perspective
title_fullStr The Time-Resolved Salt Stress Response of Dunaliella tertiolecta—A Comprehensive System Biology Perspective
title_full_unstemmed The Time-Resolved Salt Stress Response of Dunaliella tertiolecta—A Comprehensive System Biology Perspective
title_short The Time-Resolved Salt Stress Response of Dunaliella tertiolecta—A Comprehensive System Biology Perspective
title_sort time-resolved salt stress response of dunaliella tertiolecta—a comprehensive system biology perspective
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10607294/
https://www.ncbi.nlm.nih.gov/pubmed/37895054
http://dx.doi.org/10.3390/ijms242015374
work_keys_str_mv AT keillinda thetimeresolvedsaltstressresponseofdunaliellatertiolectaacomprehensivesystembiologyperspective
AT mehlmernorbert thetimeresolvedsaltstressresponseofdunaliellatertiolectaacomprehensivesystembiologyperspective
AT caveliusphilipp thetimeresolvedsaltstressresponseofdunaliellatertiolectaacomprehensivesystembiologyperspective
AT garbedaniel thetimeresolvedsaltstressresponseofdunaliellatertiolectaacomprehensivesystembiologyperspective
AT haackmartina thetimeresolvedsaltstressresponseofdunaliellatertiolectaacomprehensivesystembiologyperspective
AT ritzmanfred thetimeresolvedsaltstressresponseofdunaliellatertiolectaacomprehensivesystembiologyperspective
AT awaddania thetimeresolvedsaltstressresponseofdunaliellatertiolectaacomprehensivesystembiologyperspective
AT bruckthomas thetimeresolvedsaltstressresponseofdunaliellatertiolectaacomprehensivesystembiologyperspective
AT keillinda timeresolvedsaltstressresponseofdunaliellatertiolectaacomprehensivesystembiologyperspective
AT mehlmernorbert timeresolvedsaltstressresponseofdunaliellatertiolectaacomprehensivesystembiologyperspective
AT caveliusphilipp timeresolvedsaltstressresponseofdunaliellatertiolectaacomprehensivesystembiologyperspective
AT garbedaniel timeresolvedsaltstressresponseofdunaliellatertiolectaacomprehensivesystembiologyperspective
AT haackmartina timeresolvedsaltstressresponseofdunaliellatertiolectaacomprehensivesystembiologyperspective
AT ritzmanfred timeresolvedsaltstressresponseofdunaliellatertiolectaacomprehensivesystembiologyperspective
AT awaddania timeresolvedsaltstressresponseofdunaliellatertiolectaacomprehensivesystembiologyperspective
AT bruckthomas timeresolvedsaltstressresponseofdunaliellatertiolectaacomprehensivesystembiologyperspective