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Computational Studies to Understand the Neuroprotective Mechanism of Action Basil Compounds
Neurodegenerative diseases, such as Alzheimer’s and Parkinson’s, pose a significant global health challenge, emphasizing the need for novel neuroprotective agents. Basil (Ocimum spp.) has been recognized for its therapeutic potential, and numerous studies have reported neuroprotective effects. In th...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10609097/ https://www.ncbi.nlm.nih.gov/pubmed/37894484 http://dx.doi.org/10.3390/molecules28207005 |
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author | Singh, Varinder Mujwar, Somdutt Singh, Manjinder Singh, Tanveer Ahmad, Sheikh F. |
author_facet | Singh, Varinder Mujwar, Somdutt Singh, Manjinder Singh, Tanveer Ahmad, Sheikh F. |
author_sort | Singh, Varinder |
collection | PubMed |
description | Neurodegenerative diseases, such as Alzheimer’s and Parkinson’s, pose a significant global health challenge, emphasizing the need for novel neuroprotective agents. Basil (Ocimum spp.) has been recognized for its therapeutic potential, and numerous studies have reported neuroprotective effects. In this manuscript, we present a computational protocol to extricate the underlying mechanism of action of basil compounds in neuroprotective effects. Molecular docking-based investigation of the chemical interactions between selected bioactive compounds from basil and key neuroprotective targets, including AChE, GSK3β, γ-secretase, and sirtuin2. Our results demonstrate that basil compound myricerone caffeoyl ester possesses a high affinity of −10.01 and −8.85 kcal/mol against GSK3β and γ-secretase, respectively, indicating their potential in modulating various neurobiological processes. Additionally, molecular dynamics simulations were performed to explore the protein–ligand complexes’ stability and to analyze the bound basil compounds’ dynamic behavior. This comprehensive computational investigation enlightens the putative mechanistic basis for the neuroprotective effects of basil compounds, providing a rationale for their therapeutic use in neurodegenerative disorders after further experimental validation. |
format | Online Article Text |
id | pubmed-10609097 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-106090972023-10-28 Computational Studies to Understand the Neuroprotective Mechanism of Action Basil Compounds Singh, Varinder Mujwar, Somdutt Singh, Manjinder Singh, Tanveer Ahmad, Sheikh F. Molecules Article Neurodegenerative diseases, such as Alzheimer’s and Parkinson’s, pose a significant global health challenge, emphasizing the need for novel neuroprotective agents. Basil (Ocimum spp.) has been recognized for its therapeutic potential, and numerous studies have reported neuroprotective effects. In this manuscript, we present a computational protocol to extricate the underlying mechanism of action of basil compounds in neuroprotective effects. Molecular docking-based investigation of the chemical interactions between selected bioactive compounds from basil and key neuroprotective targets, including AChE, GSK3β, γ-secretase, and sirtuin2. Our results demonstrate that basil compound myricerone caffeoyl ester possesses a high affinity of −10.01 and −8.85 kcal/mol against GSK3β and γ-secretase, respectively, indicating their potential in modulating various neurobiological processes. Additionally, molecular dynamics simulations were performed to explore the protein–ligand complexes’ stability and to analyze the bound basil compounds’ dynamic behavior. This comprehensive computational investigation enlightens the putative mechanistic basis for the neuroprotective effects of basil compounds, providing a rationale for their therapeutic use in neurodegenerative disorders after further experimental validation. MDPI 2023-10-10 /pmc/articles/PMC10609097/ /pubmed/37894484 http://dx.doi.org/10.3390/molecules28207005 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Singh, Varinder Mujwar, Somdutt Singh, Manjinder Singh, Tanveer Ahmad, Sheikh F. Computational Studies to Understand the Neuroprotective Mechanism of Action Basil Compounds |
title | Computational Studies to Understand the Neuroprotective Mechanism of Action Basil Compounds |
title_full | Computational Studies to Understand the Neuroprotective Mechanism of Action Basil Compounds |
title_fullStr | Computational Studies to Understand the Neuroprotective Mechanism of Action Basil Compounds |
title_full_unstemmed | Computational Studies to Understand the Neuroprotective Mechanism of Action Basil Compounds |
title_short | Computational Studies to Understand the Neuroprotective Mechanism of Action Basil Compounds |
title_sort | computational studies to understand the neuroprotective mechanism of action basil compounds |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10609097/ https://www.ncbi.nlm.nih.gov/pubmed/37894484 http://dx.doi.org/10.3390/molecules28207005 |
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