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Examining the Shift in the Decomposition Channel Structure of the Soil Decomposer Food Web: A Methods Comparison

Selecting the appropriate indicators and measuring time point numbers is important for accurately examining the shift in soil gross decomposition channel structure. Through a selected case study on a natural forest vs. rainfed arable system over a two-month-long experiment, the utility of three comm...

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Autores principales: Xing, Wen, Hu, Ning, Li, Zhongfang, Yuan, Meng, Luo, Meiling, Han, Shuo, Blagodatskaya, Evgenia, Lu, Shunbao, Lou, Yilai
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10609564/
https://www.ncbi.nlm.nih.gov/pubmed/37894247
http://dx.doi.org/10.3390/microorganisms11102589
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author Xing, Wen
Hu, Ning
Li, Zhongfang
Yuan, Meng
Luo, Meiling
Han, Shuo
Blagodatskaya, Evgenia
Lu, Shunbao
Lou, Yilai
author_facet Xing, Wen
Hu, Ning
Li, Zhongfang
Yuan, Meng
Luo, Meiling
Han, Shuo
Blagodatskaya, Evgenia
Lu, Shunbao
Lou, Yilai
author_sort Xing, Wen
collection PubMed
description Selecting the appropriate indicators and measuring time point numbers is important for accurately examining the shift in soil gross decomposition channel structure. Through a selected case study on a natural forest vs. rainfed arable system over a two-month-long experiment, the utility of three commonly employed indicators (fungi to bacteria ratio (F:B), fungivore to bacterivore ratio (FF:BF), and glucosamine to muramic acid ratio (GlcN:MurN)) were compared to reflect the shift in soil gross decomposition channel structure. The requirement of measuring the time point numbers for the three indicators was also assessed, and we suggest a potential methodology. Our results revealed that the GlcN:MurN ratio was more reliable for assessing the shifts in gross decomposition channel structure for long-term land use changes, while it was less sensitive to short-term drought compared with the other two indicators. The F:B ratio was more applicable than the FF:BF ratio for reflecting both long- and short-term changes. Furthermore, the reliability of the GlcN:MurN ratio was the least dependent on measuring time point numbers. We suggest the use of multiple indicators and the adoption of multiple measuring time points for the overall methodology.
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spelling pubmed-106095642023-10-28 Examining the Shift in the Decomposition Channel Structure of the Soil Decomposer Food Web: A Methods Comparison Xing, Wen Hu, Ning Li, Zhongfang Yuan, Meng Luo, Meiling Han, Shuo Blagodatskaya, Evgenia Lu, Shunbao Lou, Yilai Microorganisms Article Selecting the appropriate indicators and measuring time point numbers is important for accurately examining the shift in soil gross decomposition channel structure. Through a selected case study on a natural forest vs. rainfed arable system over a two-month-long experiment, the utility of three commonly employed indicators (fungi to bacteria ratio (F:B), fungivore to bacterivore ratio (FF:BF), and glucosamine to muramic acid ratio (GlcN:MurN)) were compared to reflect the shift in soil gross decomposition channel structure. The requirement of measuring the time point numbers for the three indicators was also assessed, and we suggest a potential methodology. Our results revealed that the GlcN:MurN ratio was more reliable for assessing the shifts in gross decomposition channel structure for long-term land use changes, while it was less sensitive to short-term drought compared with the other two indicators. The F:B ratio was more applicable than the FF:BF ratio for reflecting both long- and short-term changes. Furthermore, the reliability of the GlcN:MurN ratio was the least dependent on measuring time point numbers. We suggest the use of multiple indicators and the adoption of multiple measuring time points for the overall methodology. MDPI 2023-10-19 /pmc/articles/PMC10609564/ /pubmed/37894247 http://dx.doi.org/10.3390/microorganisms11102589 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Xing, Wen
Hu, Ning
Li, Zhongfang
Yuan, Meng
Luo, Meiling
Han, Shuo
Blagodatskaya, Evgenia
Lu, Shunbao
Lou, Yilai
Examining the Shift in the Decomposition Channel Structure of the Soil Decomposer Food Web: A Methods Comparison
title Examining the Shift in the Decomposition Channel Structure of the Soil Decomposer Food Web: A Methods Comparison
title_full Examining the Shift in the Decomposition Channel Structure of the Soil Decomposer Food Web: A Methods Comparison
title_fullStr Examining the Shift in the Decomposition Channel Structure of the Soil Decomposer Food Web: A Methods Comparison
title_full_unstemmed Examining the Shift in the Decomposition Channel Structure of the Soil Decomposer Food Web: A Methods Comparison
title_short Examining the Shift in the Decomposition Channel Structure of the Soil Decomposer Food Web: A Methods Comparison
title_sort examining the shift in the decomposition channel structure of the soil decomposer food web: a methods comparison
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10609564/
https://www.ncbi.nlm.nih.gov/pubmed/37894247
http://dx.doi.org/10.3390/microorganisms11102589
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