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Spatial genetic structure and seed quality of a southernmost Abies nephrolepis population
Abies nephrolepis (Trautv. ex Maxim.) Maxim. has its southernmost populations in South Korea and they are expected to decline under climate change. To establish a strategic conservation plan, this study aimed to investigate the spatial genetic structure and seed characteristics of A. nephrolepis. We...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2023
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10611809/ https://www.ncbi.nlm.nih.gov/pubmed/37891234 http://dx.doi.org/10.1038/s41598-023-45635-w |
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author | Kim, Sunjeong Lee, Hye-Jin Kim, Yang-Gil Kang, Kyu-Suk |
author_facet | Kim, Sunjeong Lee, Hye-Jin Kim, Yang-Gil Kang, Kyu-Suk |
author_sort | Kim, Sunjeong |
collection | PubMed |
description | Abies nephrolepis (Trautv. ex Maxim.) Maxim. has its southernmost populations in South Korea and they are expected to decline under climate change. To establish a strategic conservation plan, this study aimed to investigate the spatial genetic structure and seed characteristics of A. nephrolepis. We used nine microsatellite markers on 165 individuals of A. nephrolepis and sampled seeds in a southernmost population at Mt. Hambaeksan, South Korea. We observed a high level of heterozygosity, and a simulation study found that sampling 20 individuals was enough to secure sufficient genetic diversity on average. Spatial autocorrelation analysis revealed that individuals had a positive genetic relationship until 30 m. Bayesian clustering models, STRUCTURE and GENELAND, failed to achieve a consensus in the optimal number of population (K), estimating K = 1 and K = 2, respectively. Principal coordinate analysis supported the absence of genetic substructure within the study population. There was a large variance in seed production among mother trees. On average, seeds of A. nephrolepis from Mt. Hambaeksan had a purity of 70.4% and a germination percentage of 32.2%. We found that seed weight was the most effective indicator of seed quality. Mother trees at higher altitudes had poorer purity which is threatening to A. nephrolepis considering the upslope retreat of subalpine species under climate change. Our results provide insights into the interactions among spatial processes, genetic structure, and seed quality within a population of A. nephrolepis. |
format | Online Article Text |
id | pubmed-10611809 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-106118092023-10-29 Spatial genetic structure and seed quality of a southernmost Abies nephrolepis population Kim, Sunjeong Lee, Hye-Jin Kim, Yang-Gil Kang, Kyu-Suk Sci Rep Article Abies nephrolepis (Trautv. ex Maxim.) Maxim. has its southernmost populations in South Korea and they are expected to decline under climate change. To establish a strategic conservation plan, this study aimed to investigate the spatial genetic structure and seed characteristics of A. nephrolepis. We used nine microsatellite markers on 165 individuals of A. nephrolepis and sampled seeds in a southernmost population at Mt. Hambaeksan, South Korea. We observed a high level of heterozygosity, and a simulation study found that sampling 20 individuals was enough to secure sufficient genetic diversity on average. Spatial autocorrelation analysis revealed that individuals had a positive genetic relationship until 30 m. Bayesian clustering models, STRUCTURE and GENELAND, failed to achieve a consensus in the optimal number of population (K), estimating K = 1 and K = 2, respectively. Principal coordinate analysis supported the absence of genetic substructure within the study population. There was a large variance in seed production among mother trees. On average, seeds of A. nephrolepis from Mt. Hambaeksan had a purity of 70.4% and a germination percentage of 32.2%. We found that seed weight was the most effective indicator of seed quality. Mother trees at higher altitudes had poorer purity which is threatening to A. nephrolepis considering the upslope retreat of subalpine species under climate change. Our results provide insights into the interactions among spatial processes, genetic structure, and seed quality within a population of A. nephrolepis. Nature Publishing Group UK 2023-10-27 /pmc/articles/PMC10611809/ /pubmed/37891234 http://dx.doi.org/10.1038/s41598-023-45635-w Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Kim, Sunjeong Lee, Hye-Jin Kim, Yang-Gil Kang, Kyu-Suk Spatial genetic structure and seed quality of a southernmost Abies nephrolepis population |
title | Spatial genetic structure and seed quality of a southernmost Abies nephrolepis population |
title_full | Spatial genetic structure and seed quality of a southernmost Abies nephrolepis population |
title_fullStr | Spatial genetic structure and seed quality of a southernmost Abies nephrolepis population |
title_full_unstemmed | Spatial genetic structure and seed quality of a southernmost Abies nephrolepis population |
title_short | Spatial genetic structure and seed quality of a southernmost Abies nephrolepis population |
title_sort | spatial genetic structure and seed quality of a southernmost abies nephrolepis population |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10611809/ https://www.ncbi.nlm.nih.gov/pubmed/37891234 http://dx.doi.org/10.1038/s41598-023-45635-w |
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