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Identification of Family with Sequence Similarity 110 Member C (FAM110C) as a Candidate Diagnostic and Prognostic Biomarker for Glioma
BACKGROUND: Gliomas are the most frequent and dangerous primary cerebral tumors. Therefore, there is a need to develop molecular targets for the diagnosis and treatment for glioma. METHODS: In September 2020, we retrieved the expression matrix of glioblastoma (GBM) sufferers and pertinent clinical d...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Tehran University of Medical Sciences
2023
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10612548/ https://www.ncbi.nlm.nih.gov/pubmed/37899918 http://dx.doi.org/10.18502/ijph.v52i10.13850 |
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author | Ren, Deshuai Zhuang, Xiaoyu Lv, Yanxin Zhang, Yun Xu, Jiazhi Gao, Fengquan Chen, Dagang Wang, Yu |
author_facet | Ren, Deshuai Zhuang, Xiaoyu Lv, Yanxin Zhang, Yun Xu, Jiazhi Gao, Fengquan Chen, Dagang Wang, Yu |
author_sort | Ren, Deshuai |
collection | PubMed |
description | BACKGROUND: Gliomas are the most frequent and dangerous primary cerebral tumors. Therefore, there is a need to develop molecular targets for the diagnosis and treatment for glioma. METHODS: In September 2020, we retrieved the expression matrix of glioblastoma (GBM) sufferers and pertinent clinical data from the TCGA (The Cancer Genome Atlas) database. Prognostic differences between various families with sequence similarity 110 member C (FAM110C) expression groups were assessed by Kaplan-Meier with log-rank test. The R platform get used to assess the accuracy of FAM110C delivery in predicting the prognosis of PDAC using a time-dependent receptor operating characteristic (ROC) curve. The delivery level of FAM110C was determined by qRT-PCR and western blot. Gene set enrichment investigated possible mechanisms between different FAM110C expression groups in GBM (GSEA). The impact of FAM110C on glioma cell movement was discovered using migration test. The drug’s gene-targeting impact was validated by the CCK8 test. RESULTS: A total of 173 GBM samples were obtained from the TCGA database, with 148 including information on IDH1 mutations and 151 containing information on overall survival. The mRNA expression level of FAM110C was greater in wild-type GBM, according to qRT-PCR data. The connection between FAM110C expression and Hallmark, GO, and KEGG pathway gene sets was investigated using GSEA software. We used migration test to assess the impact of FAM110C on glioma motility in order to confirm the findings of the GSEA analysis. CONCLUSION: FAM110C might get used as a possible diagnostic and prognostic biomarker for wild-type GBM, and its inhibition could be used to prevention and treatment wild-type GBM. |
format | Online Article Text |
id | pubmed-10612548 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Tehran University of Medical Sciences |
record_format | MEDLINE/PubMed |
spelling | pubmed-106125482023-10-29 Identification of Family with Sequence Similarity 110 Member C (FAM110C) as a Candidate Diagnostic and Prognostic Biomarker for Glioma Ren, Deshuai Zhuang, Xiaoyu Lv, Yanxin Zhang, Yun Xu, Jiazhi Gao, Fengquan Chen, Dagang Wang, Yu Iran J Public Health Original Article BACKGROUND: Gliomas are the most frequent and dangerous primary cerebral tumors. Therefore, there is a need to develop molecular targets for the diagnosis and treatment for glioma. METHODS: In September 2020, we retrieved the expression matrix of glioblastoma (GBM) sufferers and pertinent clinical data from the TCGA (The Cancer Genome Atlas) database. Prognostic differences between various families with sequence similarity 110 member C (FAM110C) expression groups were assessed by Kaplan-Meier with log-rank test. The R platform get used to assess the accuracy of FAM110C delivery in predicting the prognosis of PDAC using a time-dependent receptor operating characteristic (ROC) curve. The delivery level of FAM110C was determined by qRT-PCR and western blot. Gene set enrichment investigated possible mechanisms between different FAM110C expression groups in GBM (GSEA). The impact of FAM110C on glioma cell movement was discovered using migration test. The drug’s gene-targeting impact was validated by the CCK8 test. RESULTS: A total of 173 GBM samples were obtained from the TCGA database, with 148 including information on IDH1 mutations and 151 containing information on overall survival. The mRNA expression level of FAM110C was greater in wild-type GBM, according to qRT-PCR data. The connection between FAM110C expression and Hallmark, GO, and KEGG pathway gene sets was investigated using GSEA software. We used migration test to assess the impact of FAM110C on glioma motility in order to confirm the findings of the GSEA analysis. CONCLUSION: FAM110C might get used as a possible diagnostic and prognostic biomarker for wild-type GBM, and its inhibition could be used to prevention and treatment wild-type GBM. Tehran University of Medical Sciences 2023-10 /pmc/articles/PMC10612548/ /pubmed/37899918 http://dx.doi.org/10.18502/ijph.v52i10.13850 Text en Copyright © 2023 Ren et al. Published by Tehran University of Medical Sciences. https://creativecommons.org/licenses/by-nc/4.0/This work is licensed under a Creative Commons Attribution-NonCommercial 4.0 International license. (https://creativecommons.org/licenses/by-nc/4.0/). Non-commercial uses of the work are permitted, provided the original work is properly cited |
spellingShingle | Original Article Ren, Deshuai Zhuang, Xiaoyu Lv, Yanxin Zhang, Yun Xu, Jiazhi Gao, Fengquan Chen, Dagang Wang, Yu Identification of Family with Sequence Similarity 110 Member C (FAM110C) as a Candidate Diagnostic and Prognostic Biomarker for Glioma |
title | Identification of Family with Sequence Similarity 110 Member C (FAM110C) as a Candidate Diagnostic and Prognostic Biomarker for Glioma |
title_full | Identification of Family with Sequence Similarity 110 Member C (FAM110C) as a Candidate Diagnostic and Prognostic Biomarker for Glioma |
title_fullStr | Identification of Family with Sequence Similarity 110 Member C (FAM110C) as a Candidate Diagnostic and Prognostic Biomarker for Glioma |
title_full_unstemmed | Identification of Family with Sequence Similarity 110 Member C (FAM110C) as a Candidate Diagnostic and Prognostic Biomarker for Glioma |
title_short | Identification of Family with Sequence Similarity 110 Member C (FAM110C) as a Candidate Diagnostic and Prognostic Biomarker for Glioma |
title_sort | identification of family with sequence similarity 110 member c (fam110c) as a candidate diagnostic and prognostic biomarker for glioma |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10612548/ https://www.ncbi.nlm.nih.gov/pubmed/37899918 http://dx.doi.org/10.18502/ijph.v52i10.13850 |
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