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Clarifying the Temporal Dynamics of the Circadian Clock and Flowering Gene Network Using Overexpression and Targeted Mutagenesis of Soybean EARLY FLOWERING 3-1 ( GmELF3-1 )

With progressing climate fluctuations, an understanding of the molecular mechanisms of crop plants that regulate their flowering responses to environments is crucial. To achieve this goal, we aimed at clarifying the gene regulatory networks among the circadian clock and flowering genes in soybean (...

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Autores principales: Alcantara, Michelle, Iftikhar, Hira, Kagan, Kimberly, Dzheyranyan, Dianna, Abbasi, Pedram, Alamilla, Alejandra, Ayala, Nicole, Baca, Trixy, Benoit, Vanessa, Clausen, Natalia, Coto, Caroline, Guerrero, Celia, Hernandez Catalan, Erik, Hurtado, Sierra, Lopez, Angela, Lopez, Jacqueline, Majarian, Nicholas, Mesfin, Noah, Mishegyan, Avetis, Mkrtchyan, Goharik, Ordonez, Amy, Pachanyan, Arthur, Pelayo, Tanya, Rosas, Alondra, Rowsey, Kylee, Sharma, Elina, Sharma, Sanjiti, Van Grinsven, Shauna, Hanzawa, Yoshie
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Caltech Library 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10613878/
https://www.ncbi.nlm.nih.gov/pubmed/37908495
http://dx.doi.org/10.17912/micropub.biology.000935
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author Alcantara, Michelle
Iftikhar, Hira
Kagan, Kimberly
Dzheyranyan, Dianna
Abbasi, Pedram
Alamilla, Alejandra
Ayala, Nicole
Baca, Trixy
Benoit, Vanessa
Clausen, Natalia
Coto, Caroline
Guerrero, Celia
Hernandez Catalan, Erik
Hurtado, Sierra
Lopez, Angela
Lopez, Jacqueline
Majarian, Nicholas
Mesfin, Noah
Mishegyan, Avetis
Mkrtchyan, Goharik
Ordonez, Amy
Pachanyan, Arthur
Pelayo, Tanya
Rosas, Alondra
Rowsey, Kylee
Sharma, Elina
Sharma, Sanjiti
Van Grinsven, Shauna
Hanzawa, Yoshie
author_facet Alcantara, Michelle
Iftikhar, Hira
Kagan, Kimberly
Dzheyranyan, Dianna
Abbasi, Pedram
Alamilla, Alejandra
Ayala, Nicole
Baca, Trixy
Benoit, Vanessa
Clausen, Natalia
Coto, Caroline
Guerrero, Celia
Hernandez Catalan, Erik
Hurtado, Sierra
Lopez, Angela
Lopez, Jacqueline
Majarian, Nicholas
Mesfin, Noah
Mishegyan, Avetis
Mkrtchyan, Goharik
Ordonez, Amy
Pachanyan, Arthur
Pelayo, Tanya
Rosas, Alondra
Rowsey, Kylee
Sharma, Elina
Sharma, Sanjiti
Van Grinsven, Shauna
Hanzawa, Yoshie
author_sort Alcantara, Michelle
collection PubMed
description With progressing climate fluctuations, an understanding of the molecular mechanisms of crop plants that regulate their flowering responses to environments is crucial. To achieve this goal, we aimed at clarifying the gene regulatory networks among the circadian clock and flowering genes in soybean ( Glycine max ). Based on our network inference approach , we hypothesize that GmELF3-1 , one of the Evening Complex (EC) gene homologs in soybean’s circadian clock, may have an integrative role in transcriptional regulation of the circadian clock and flowering gene network. In this study, we verify GmELF3-1 ’ s regulatory roles in its potential downstream genes by modulating the activity of GmELF3-1 using overexpression and CRISPR-Cas9 in soybean protoplasts. Our results indicate that GmELF3-1 may control the expression of the PRR genes in the circadian clock and the flowering gene GmCOL1a .
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spelling pubmed-106138782023-10-31 Clarifying the Temporal Dynamics of the Circadian Clock and Flowering Gene Network Using Overexpression and Targeted Mutagenesis of Soybean EARLY FLOWERING 3-1 ( GmELF3-1 ) Alcantara, Michelle Iftikhar, Hira Kagan, Kimberly Dzheyranyan, Dianna Abbasi, Pedram Alamilla, Alejandra Ayala, Nicole Baca, Trixy Benoit, Vanessa Clausen, Natalia Coto, Caroline Guerrero, Celia Hernandez Catalan, Erik Hurtado, Sierra Lopez, Angela Lopez, Jacqueline Majarian, Nicholas Mesfin, Noah Mishegyan, Avetis Mkrtchyan, Goharik Ordonez, Amy Pachanyan, Arthur Pelayo, Tanya Rosas, Alondra Rowsey, Kylee Sharma, Elina Sharma, Sanjiti Van Grinsven, Shauna Hanzawa, Yoshie MicroPubl Biol New Finding With progressing climate fluctuations, an understanding of the molecular mechanisms of crop plants that regulate their flowering responses to environments is crucial. To achieve this goal, we aimed at clarifying the gene regulatory networks among the circadian clock and flowering genes in soybean ( Glycine max ). Based on our network inference approach , we hypothesize that GmELF3-1 , one of the Evening Complex (EC) gene homologs in soybean’s circadian clock, may have an integrative role in transcriptional regulation of the circadian clock and flowering gene network. In this study, we verify GmELF3-1 ’ s regulatory roles in its potential downstream genes by modulating the activity of GmELF3-1 using overexpression and CRISPR-Cas9 in soybean protoplasts. Our results indicate that GmELF3-1 may control the expression of the PRR genes in the circadian clock and the flowering gene GmCOL1a . Caltech Library 2023-10-15 /pmc/articles/PMC10613878/ /pubmed/37908495 http://dx.doi.org/10.17912/micropub.biology.000935 Text en Copyright: © 2023 by the authors https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle New Finding
Alcantara, Michelle
Iftikhar, Hira
Kagan, Kimberly
Dzheyranyan, Dianna
Abbasi, Pedram
Alamilla, Alejandra
Ayala, Nicole
Baca, Trixy
Benoit, Vanessa
Clausen, Natalia
Coto, Caroline
Guerrero, Celia
Hernandez Catalan, Erik
Hurtado, Sierra
Lopez, Angela
Lopez, Jacqueline
Majarian, Nicholas
Mesfin, Noah
Mishegyan, Avetis
Mkrtchyan, Goharik
Ordonez, Amy
Pachanyan, Arthur
Pelayo, Tanya
Rosas, Alondra
Rowsey, Kylee
Sharma, Elina
Sharma, Sanjiti
Van Grinsven, Shauna
Hanzawa, Yoshie
Clarifying the Temporal Dynamics of the Circadian Clock and Flowering Gene Network Using Overexpression and Targeted Mutagenesis of Soybean EARLY FLOWERING 3-1 ( GmELF3-1 )
title Clarifying the Temporal Dynamics of the Circadian Clock and Flowering Gene Network Using Overexpression and Targeted Mutagenesis of Soybean EARLY FLOWERING 3-1 ( GmELF3-1 )
title_full Clarifying the Temporal Dynamics of the Circadian Clock and Flowering Gene Network Using Overexpression and Targeted Mutagenesis of Soybean EARLY FLOWERING 3-1 ( GmELF3-1 )
title_fullStr Clarifying the Temporal Dynamics of the Circadian Clock and Flowering Gene Network Using Overexpression and Targeted Mutagenesis of Soybean EARLY FLOWERING 3-1 ( GmELF3-1 )
title_full_unstemmed Clarifying the Temporal Dynamics of the Circadian Clock and Flowering Gene Network Using Overexpression and Targeted Mutagenesis of Soybean EARLY FLOWERING 3-1 ( GmELF3-1 )
title_short Clarifying the Temporal Dynamics of the Circadian Clock and Flowering Gene Network Using Overexpression and Targeted Mutagenesis of Soybean EARLY FLOWERING 3-1 ( GmELF3-1 )
title_sort clarifying the temporal dynamics of the circadian clock and flowering gene network using overexpression and targeted mutagenesis of soybean early flowering 3-1 ( gmelf3-1 )
topic New Finding
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10613878/
https://www.ncbi.nlm.nih.gov/pubmed/37908495
http://dx.doi.org/10.17912/micropub.biology.000935
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