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Identification and Validation of an Aging-Associated circRNA-miRNA-mRNA Network in Neovascular Age-Related Macular Degeneration

INTRODUCTION: Neovascular age-related macular degeneration (NVAMD) is a leading cause of severe vision impairment in the elderly. Aging is one of the most pivotal underlying molecular mechanisms of NVAMD. METHODS: In this study, we identified the potential aging-related genes involved in NVAMD. Cons...

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Autores principales: Wu, Jiali, Jiang, Yuxin, Sun, Junran, Sun, Xiaodong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: S. Karger AG 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10614246/
https://www.ncbi.nlm.nih.gov/pubmed/37604141
http://dx.doi.org/10.1159/000531287
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author Wu, Jiali
Jiang, Yuxin
Sun, Junran
Sun, Xiaodong
author_facet Wu, Jiali
Jiang, Yuxin
Sun, Junran
Sun, Xiaodong
author_sort Wu, Jiali
collection PubMed
description INTRODUCTION: Neovascular age-related macular degeneration (NVAMD) is a leading cause of severe vision impairment in the elderly. Aging is one of the most pivotal underlying molecular mechanisms of NVAMD. METHODS: In this study, we identified the potential aging-related genes involved in NVAMD. Considering that noncoding RNAs are vital regulators of NVAMD progression, we further explored and constructed an aging-originated circRNA-miRNA-mRNA network of NVAMD. Differential expression of 23 aging-associated genes was identified based on sequencing data and the Human Aging Genomic Resources tool at a threshold of p < 0.05, and log(2)|fold change| > 1. RESULTS: We screened 12 microRNAs (miRNAs) using public datasets and miRNet database. A total of 13 circRNAs were subsequently mined using the starBase tool. Merging these 13 circRNAs, 12 miRNAs, and 15 genes together, we obtained 281 pairs of circRNA-miRNA and 30 pairs of miRNA-mRNA. CONCLUSION: We created an aging-related circRNA-miRNA-mRNA network, which could be a promising target for future AMD treatments.
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spelling pubmed-106142462023-10-31 Identification and Validation of an Aging-Associated circRNA-miRNA-mRNA Network in Neovascular Age-Related Macular Degeneration Wu, Jiali Jiang, Yuxin Sun, Junran Sun, Xiaodong Gerontology Experimental Section: Research Article INTRODUCTION: Neovascular age-related macular degeneration (NVAMD) is a leading cause of severe vision impairment in the elderly. Aging is one of the most pivotal underlying molecular mechanisms of NVAMD. METHODS: In this study, we identified the potential aging-related genes involved in NVAMD. Considering that noncoding RNAs are vital regulators of NVAMD progression, we further explored and constructed an aging-originated circRNA-miRNA-mRNA network of NVAMD. Differential expression of 23 aging-associated genes was identified based on sequencing data and the Human Aging Genomic Resources tool at a threshold of p < 0.05, and log(2)|fold change| > 1. RESULTS: We screened 12 microRNAs (miRNAs) using public datasets and miRNet database. A total of 13 circRNAs were subsequently mined using the starBase tool. Merging these 13 circRNAs, 12 miRNAs, and 15 genes together, we obtained 281 pairs of circRNA-miRNA and 30 pairs of miRNA-mRNA. CONCLUSION: We created an aging-related circRNA-miRNA-mRNA network, which could be a promising target for future AMD treatments. S. Karger AG 2023-10 2023-08-21 /pmc/articles/PMC10614246/ /pubmed/37604141 http://dx.doi.org/10.1159/000531287 Text en Copyright © 2023 by The Author(s). Published by S. Karger AG, Basel https://creativecommons.org/licenses/by-nc/4.0/This article is licensed under the Creative Commons Attribution-NonCommercial 4.0 International License (CC BY-NC). Usage and distribution for commercial purposes requires written permission.
spellingShingle Experimental Section: Research Article
Wu, Jiali
Jiang, Yuxin
Sun, Junran
Sun, Xiaodong
Identification and Validation of an Aging-Associated circRNA-miRNA-mRNA Network in Neovascular Age-Related Macular Degeneration
title Identification and Validation of an Aging-Associated circRNA-miRNA-mRNA Network in Neovascular Age-Related Macular Degeneration
title_full Identification and Validation of an Aging-Associated circRNA-miRNA-mRNA Network in Neovascular Age-Related Macular Degeneration
title_fullStr Identification and Validation of an Aging-Associated circRNA-miRNA-mRNA Network in Neovascular Age-Related Macular Degeneration
title_full_unstemmed Identification and Validation of an Aging-Associated circRNA-miRNA-mRNA Network in Neovascular Age-Related Macular Degeneration
title_short Identification and Validation of an Aging-Associated circRNA-miRNA-mRNA Network in Neovascular Age-Related Macular Degeneration
title_sort identification and validation of an aging-associated circrna-mirna-mrna network in neovascular age-related macular degeneration
topic Experimental Section: Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10614246/
https://www.ncbi.nlm.nih.gov/pubmed/37604141
http://dx.doi.org/10.1159/000531287
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