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Prevalence and significance of clonal hematopoiesis of indeterminate potential in lung transplant recipients
BACKGROUND: Clonal hematopoiesis of indeterminate potential (CHIP), the age-related acquisition of somatic mutations that leads to an expanded blood cell clone, has been associated with development of a pro-inflammatory state. An enhanced or dysregulated inflammatory response may contribute to rejec...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10614406/ https://www.ncbi.nlm.nih.gov/pubmed/37904125 http://dx.doi.org/10.1186/s12890-023-02703-1 |
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author | Swaminathan, Aparna C. Barfield, Richard Zhang, Mengqi Povysil, Gundula Chen, Cliburn Frankel, Courtney Kelly, Francine McKinney, Matthew Todd, Jamie L. Allen, Andrew Palmer, Scott M. |
author_facet | Swaminathan, Aparna C. Barfield, Richard Zhang, Mengqi Povysil, Gundula Chen, Cliburn Frankel, Courtney Kelly, Francine McKinney, Matthew Todd, Jamie L. Allen, Andrew Palmer, Scott M. |
author_sort | Swaminathan, Aparna C. |
collection | PubMed |
description | BACKGROUND: Clonal hematopoiesis of indeterminate potential (CHIP), the age-related acquisition of somatic mutations that leads to an expanded blood cell clone, has been associated with development of a pro-inflammatory state. An enhanced or dysregulated inflammatory response may contribute to rejection after lung transplantation, however the prevalence of CHIP in lung recipients and influence of CHIP on allograft outcomes is unknown. METHODS: We analyzed whole-exome sequencing data in 279 lung recipients to detect CHIP, defined by pre-specified somatic mutations in 74 genes known to promote clonal expansion of hematopoietic stem cells. We compared the burden of acute rejection (AR) over the first post-transplant year in lung recipients with vs. without CHIP using multivariable ordinal regression. Multivariate Cox proportional hazards models were used to assess the association between CHIP and CLAD-free survival. An exploratory analysis evaluated the association between the number of CHIP-associated variants and chronic lung allograft dysfunction (CLAD)-free survival. RESULTS: We detected 64 CHIP-associated mutations in 45 individuals (15.7%), most commonly in TET2 (10.8%), DNMT3A (9.2%), and U2AF1 (9.2%). Patients with CHIP tended to be older but did not significantly differ from patients without CHIP in terms of race or native lung disease. Patients with CHIP did not have a higher incidence of AR over the first post-transplant year (p = 0.45) or a significantly increased risk of death or CLAD (adjusted HR 1.25, 95% CI 0.88–1.78). We did observe a significant association between the number of CHIP variants and CLAD-free survival, specifically patients with 2 or more CHIP-associated variants had an increased risk for death or CLAD (adjusted HR 3.79, 95% CI 1.98–7.27). CONCLUSIONS: Lung recipients have a higher prevalence of CHIP and a larger variety of genes with CHIP-associated mutations compared with previous reports for the general population. CHIP did not increase the risk of AR, CLAD, or death in lung recipients. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12890-023-02703-1. |
format | Online Article Text |
id | pubmed-10614406 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-106144062023-10-31 Prevalence and significance of clonal hematopoiesis of indeterminate potential in lung transplant recipients Swaminathan, Aparna C. Barfield, Richard Zhang, Mengqi Povysil, Gundula Chen, Cliburn Frankel, Courtney Kelly, Francine McKinney, Matthew Todd, Jamie L. Allen, Andrew Palmer, Scott M. BMC Pulm Med Research BACKGROUND: Clonal hematopoiesis of indeterminate potential (CHIP), the age-related acquisition of somatic mutations that leads to an expanded blood cell clone, has been associated with development of a pro-inflammatory state. An enhanced or dysregulated inflammatory response may contribute to rejection after lung transplantation, however the prevalence of CHIP in lung recipients and influence of CHIP on allograft outcomes is unknown. METHODS: We analyzed whole-exome sequencing data in 279 lung recipients to detect CHIP, defined by pre-specified somatic mutations in 74 genes known to promote clonal expansion of hematopoietic stem cells. We compared the burden of acute rejection (AR) over the first post-transplant year in lung recipients with vs. without CHIP using multivariable ordinal regression. Multivariate Cox proportional hazards models were used to assess the association between CHIP and CLAD-free survival. An exploratory analysis evaluated the association between the number of CHIP-associated variants and chronic lung allograft dysfunction (CLAD)-free survival. RESULTS: We detected 64 CHIP-associated mutations in 45 individuals (15.7%), most commonly in TET2 (10.8%), DNMT3A (9.2%), and U2AF1 (9.2%). Patients with CHIP tended to be older but did not significantly differ from patients without CHIP in terms of race or native lung disease. Patients with CHIP did not have a higher incidence of AR over the first post-transplant year (p = 0.45) or a significantly increased risk of death or CLAD (adjusted HR 1.25, 95% CI 0.88–1.78). We did observe a significant association between the number of CHIP variants and CLAD-free survival, specifically patients with 2 or more CHIP-associated variants had an increased risk for death or CLAD (adjusted HR 3.79, 95% CI 1.98–7.27). CONCLUSIONS: Lung recipients have a higher prevalence of CHIP and a larger variety of genes with CHIP-associated mutations compared with previous reports for the general population. CHIP did not increase the risk of AR, CLAD, or death in lung recipients. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12890-023-02703-1. BioMed Central 2023-10-30 /pmc/articles/PMC10614406/ /pubmed/37904125 http://dx.doi.org/10.1186/s12890-023-02703-1 Text en © This is a U.S. Government work and not under copyright protection in the US; foreign copyright protection may apply 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Swaminathan, Aparna C. Barfield, Richard Zhang, Mengqi Povysil, Gundula Chen, Cliburn Frankel, Courtney Kelly, Francine McKinney, Matthew Todd, Jamie L. Allen, Andrew Palmer, Scott M. Prevalence and significance of clonal hematopoiesis of indeterminate potential in lung transplant recipients |
title | Prevalence and significance of clonal hematopoiesis of indeterminate potential in lung transplant recipients |
title_full | Prevalence and significance of clonal hematopoiesis of indeterminate potential in lung transplant recipients |
title_fullStr | Prevalence and significance of clonal hematopoiesis of indeterminate potential in lung transplant recipients |
title_full_unstemmed | Prevalence and significance of clonal hematopoiesis of indeterminate potential in lung transplant recipients |
title_short | Prevalence and significance of clonal hematopoiesis of indeterminate potential in lung transplant recipients |
title_sort | prevalence and significance of clonal hematopoiesis of indeterminate potential in lung transplant recipients |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10614406/ https://www.ncbi.nlm.nih.gov/pubmed/37904125 http://dx.doi.org/10.1186/s12890-023-02703-1 |
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