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Adaptive modeling and inference of higher-order coordination in neuronal assemblies: a dynamic greedy estimation approach
Central in the study of population codes, coordinated ensemble spiking activity is widely observable in neural recordings with hypothesized roles in robust stimulus representation, interareal communication, and learning and memory formation. Model-free measures of synchrony characterize coherent pai...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Cold Spring Harbor Laboratory
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10614874/ https://www.ncbi.nlm.nih.gov/pubmed/37905104 http://dx.doi.org/10.1101/2023.10.16.562647 |
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author | Mukherjee, Shoutik Babadi, Behtash |
author_facet | Mukherjee, Shoutik Babadi, Behtash |
author_sort | Mukherjee, Shoutik |
collection | PubMed |
description | Central in the study of population codes, coordinated ensemble spiking activity is widely observable in neural recordings with hypothesized roles in robust stimulus representation, interareal communication, and learning and memory formation. Model-free measures of synchrony characterize coherent pairwise activity but not higher-order interactions, a limitation transcended by statistical models of ensemble spiking activity. However, existing model-based analyses often impose assumptions about the relevance of higher-order interactions and require repeated trials to characterize dynamics in the correlational structure of ensemble activity. To address these shortcomings, we propose an adaptive greedy filtering algorithm based on a discretized mark point-process model of ensemble spiking and a corresponding statistical inference framework to identify significant higher-order coordination. In the course of developing a precise statistical test, we show that confidence intervals can be constructed for greedily estimated parameters. We demonstrate the utility of our proposed methods on simulated neuronal assemblies. Applied to multi-electrode recordings from human and rat cortical assemblies, our proposed methods provide new insights into the dynamics underlying localized population activity during transitions between brain states. |
format | Online Article Text |
id | pubmed-10614874 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Cold Spring Harbor Laboratory |
record_format | MEDLINE/PubMed |
spelling | pubmed-106148742023-10-31 Adaptive modeling and inference of higher-order coordination in neuronal assemblies: a dynamic greedy estimation approach Mukherjee, Shoutik Babadi, Behtash bioRxiv Article Central in the study of population codes, coordinated ensemble spiking activity is widely observable in neural recordings with hypothesized roles in robust stimulus representation, interareal communication, and learning and memory formation. Model-free measures of synchrony characterize coherent pairwise activity but not higher-order interactions, a limitation transcended by statistical models of ensemble spiking activity. However, existing model-based analyses often impose assumptions about the relevance of higher-order interactions and require repeated trials to characterize dynamics in the correlational structure of ensemble activity. To address these shortcomings, we propose an adaptive greedy filtering algorithm based on a discretized mark point-process model of ensemble spiking and a corresponding statistical inference framework to identify significant higher-order coordination. In the course of developing a precise statistical test, we show that confidence intervals can be constructed for greedily estimated parameters. We demonstrate the utility of our proposed methods on simulated neuronal assemblies. Applied to multi-electrode recordings from human and rat cortical assemblies, our proposed methods provide new insights into the dynamics underlying localized population activity during transitions between brain states. Cold Spring Harbor Laboratory 2023-10-17 /pmc/articles/PMC10614874/ /pubmed/37905104 http://dx.doi.org/10.1101/2023.10.16.562647 Text en https://creativecommons.org/licenses/by/4.0/This work is licensed under a Creative Commons Attribution 4.0 International License (https://creativecommons.org/licenses/by/4.0/) , which allows reusers to distribute, remix, adapt, and build upon the material in any medium or format, so long as attribution is given to the creator. The license allows for commercial use. |
spellingShingle | Article Mukherjee, Shoutik Babadi, Behtash Adaptive modeling and inference of higher-order coordination in neuronal assemblies: a dynamic greedy estimation approach |
title | Adaptive modeling and inference of higher-order coordination in neuronal assemblies: a dynamic greedy estimation approach |
title_full | Adaptive modeling and inference of higher-order coordination in neuronal assemblies: a dynamic greedy estimation approach |
title_fullStr | Adaptive modeling and inference of higher-order coordination in neuronal assemblies: a dynamic greedy estimation approach |
title_full_unstemmed | Adaptive modeling and inference of higher-order coordination in neuronal assemblies: a dynamic greedy estimation approach |
title_short | Adaptive modeling and inference of higher-order coordination in neuronal assemblies: a dynamic greedy estimation approach |
title_sort | adaptive modeling and inference of higher-order coordination in neuronal assemblies: a dynamic greedy estimation approach |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10614874/ https://www.ncbi.nlm.nih.gov/pubmed/37905104 http://dx.doi.org/10.1101/2023.10.16.562647 |
work_keys_str_mv | AT mukherjeeshoutik adaptivemodelingandinferenceofhigherordercoordinationinneuronalassembliesadynamicgreedyestimationapproach AT babadibehtash adaptivemodelingandinferenceofhigherordercoordinationinneuronalassembliesadynamicgreedyestimationapproach |