Cargando…

Global control of cellular physiology by biomolecular condensates through modulation of electrochemical equilibria

Control of the electrochemical environment in living cells is typically attributed to ion channels. Here we show that the formation of biomolecular condensates can modulate the electrochemical environment in cells, which affects processes globally within the cell and interactions of the cell with it...

Descripción completa

Detalles Bibliográficos
Autores principales: Dai, Yifan, Zhou, Zhengqing, Kim, Kyeri, Rivera, Nelson, Mohammed, Javid, Hsu-Kim, Heileen, Chilkoti, Ashutosh, You, Lingchong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10614965/
https://www.ncbi.nlm.nih.gov/pubmed/37904914
http://dx.doi.org/10.1101/2023.10.19.563018
_version_ 1785129126813761536
author Dai, Yifan
Zhou, Zhengqing
Kim, Kyeri
Rivera, Nelson
Mohammed, Javid
Hsu-Kim, Heileen
Chilkoti, Ashutosh
You, Lingchong
author_facet Dai, Yifan
Zhou, Zhengqing
Kim, Kyeri
Rivera, Nelson
Mohammed, Javid
Hsu-Kim, Heileen
Chilkoti, Ashutosh
You, Lingchong
author_sort Dai, Yifan
collection PubMed
description Control of the electrochemical environment in living cells is typically attributed to ion channels. Here we show that the formation of biomolecular condensates can modulate the electrochemical environment in cells, which affects processes globally within the cell and interactions of the cell with its environment. Condensate formation results in the depletion or enrichment of certain ions, generating intracellular ion gradients. These gradients directly affect the electrochemical properties of a cell, including the cytoplasmic pH and hyperpolarization of the membrane potential. The modulation of the electrochemical equilibria between the intra- and extra-cellular environments by biomolecular condensates governs charge-dependent uptake of small molecules by cells, and thereby directly influences bacterial survival under antibiotic stress. The shift of the intracellular electrochemical equilibria by condensate formation also drives a global change of the gene expression profile. The control of the cytoplasmic environment by condensates is correlated with their volume fraction, which can be highly variable between cells due to the stochastic nature of gene expression at the single cell level. Thus, condensate formation can amplify cell-cell variability of the environmental effects induced by the shift of cellular electrochemical equilibria. Our work reveals new biochemical functions of condensates, which extend beyond the biomolecules driving and participating in condensate formation, and uncovers a new role of biomolecular condensates in cellular regulation.
format Online
Article
Text
id pubmed-10614965
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Cold Spring Harbor Laboratory
record_format MEDLINE/PubMed
spelling pubmed-106149652023-10-31 Global control of cellular physiology by biomolecular condensates through modulation of electrochemical equilibria Dai, Yifan Zhou, Zhengqing Kim, Kyeri Rivera, Nelson Mohammed, Javid Hsu-Kim, Heileen Chilkoti, Ashutosh You, Lingchong bioRxiv Article Control of the electrochemical environment in living cells is typically attributed to ion channels. Here we show that the formation of biomolecular condensates can modulate the electrochemical environment in cells, which affects processes globally within the cell and interactions of the cell with its environment. Condensate formation results in the depletion or enrichment of certain ions, generating intracellular ion gradients. These gradients directly affect the electrochemical properties of a cell, including the cytoplasmic pH and hyperpolarization of the membrane potential. The modulation of the electrochemical equilibria between the intra- and extra-cellular environments by biomolecular condensates governs charge-dependent uptake of small molecules by cells, and thereby directly influences bacterial survival under antibiotic stress. The shift of the intracellular electrochemical equilibria by condensate formation also drives a global change of the gene expression profile. The control of the cytoplasmic environment by condensates is correlated with their volume fraction, which can be highly variable between cells due to the stochastic nature of gene expression at the single cell level. Thus, condensate formation can amplify cell-cell variability of the environmental effects induced by the shift of cellular electrochemical equilibria. Our work reveals new biochemical functions of condensates, which extend beyond the biomolecules driving and participating in condensate formation, and uncovers a new role of biomolecular condensates in cellular regulation. Cold Spring Harbor Laboratory 2023-10-20 /pmc/articles/PMC10614965/ /pubmed/37904914 http://dx.doi.org/10.1101/2023.10.19.563018 Text en https://creativecommons.org/licenses/by-nc-nd/4.0/This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License (https://creativecommons.org/licenses/by-nc-nd/4.0/) , which allows reusers to copy and distribute the material in any medium or format in unadapted form only, for noncommercial purposes only, and only so long as attribution is given to the creator.
spellingShingle Article
Dai, Yifan
Zhou, Zhengqing
Kim, Kyeri
Rivera, Nelson
Mohammed, Javid
Hsu-Kim, Heileen
Chilkoti, Ashutosh
You, Lingchong
Global control of cellular physiology by biomolecular condensates through modulation of electrochemical equilibria
title Global control of cellular physiology by biomolecular condensates through modulation of electrochemical equilibria
title_full Global control of cellular physiology by biomolecular condensates through modulation of electrochemical equilibria
title_fullStr Global control of cellular physiology by biomolecular condensates through modulation of electrochemical equilibria
title_full_unstemmed Global control of cellular physiology by biomolecular condensates through modulation of electrochemical equilibria
title_short Global control of cellular physiology by biomolecular condensates through modulation of electrochemical equilibria
title_sort global control of cellular physiology by biomolecular condensates through modulation of electrochemical equilibria
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10614965/
https://www.ncbi.nlm.nih.gov/pubmed/37904914
http://dx.doi.org/10.1101/2023.10.19.563018
work_keys_str_mv AT daiyifan globalcontrolofcellularphysiologybybiomolecularcondensatesthroughmodulationofelectrochemicalequilibria
AT zhouzhengqing globalcontrolofcellularphysiologybybiomolecularcondensatesthroughmodulationofelectrochemicalequilibria
AT kimkyeri globalcontrolofcellularphysiologybybiomolecularcondensatesthroughmodulationofelectrochemicalequilibria
AT riveranelson globalcontrolofcellularphysiologybybiomolecularcondensatesthroughmodulationofelectrochemicalequilibria
AT mohammedjavid globalcontrolofcellularphysiologybybiomolecularcondensatesthroughmodulationofelectrochemicalequilibria
AT hsukimheileen globalcontrolofcellularphysiologybybiomolecularcondensatesthroughmodulationofelectrochemicalequilibria
AT chilkotiashutosh globalcontrolofcellularphysiologybybiomolecularcondensatesthroughmodulationofelectrochemicalequilibria
AT youlingchong globalcontrolofcellularphysiologybybiomolecularcondensatesthroughmodulationofelectrochemicalequilibria