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Exactly solvable statistical physics models for large neuronal populations
Maximum entropy methods provide a principled path connecting measurements of neural activity directly to statistical physics models, and this approach has been successful for populations of [Formula: see text] neurons. As [Formula: see text] increases in new experiments, we enter an undersampled reg...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Cornell University
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10614989/ https://www.ncbi.nlm.nih.gov/pubmed/37904743 |
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author | Lynn, Christopher W. Yu, Qiwei Pang, Rich Bialek, William Palmer, Stephanie E. |
author_facet | Lynn, Christopher W. Yu, Qiwei Pang, Rich Bialek, William Palmer, Stephanie E. |
author_sort | Lynn, Christopher W. |
collection | PubMed |
description | Maximum entropy methods provide a principled path connecting measurements of neural activity directly to statistical physics models, and this approach has been successful for populations of [Formula: see text] neurons. As [Formula: see text] increases in new experiments, we enter an undersampled regime where we have to choose which observables should be constrained in the maximum entropy construction. The best choice is the one that provides the greatest reduction in entropy, defining a “minimax entropy” principle. This principle becomes tractable if we restrict attention to correlations among pairs of neurons that link together into a tree; we can find the best tree efficiently, and the underlying statistical physics models are exactly solved. We use this approach to analyze experiments on [Formula: see text] neurons in the mouse hippocampus, and show that the resulting model captures the distribution of synchronous activity in the network. |
format | Online Article Text |
id | pubmed-10614989 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Cornell University |
record_format | MEDLINE/PubMed |
spelling | pubmed-106149892023-10-31 Exactly solvable statistical physics models for large neuronal populations Lynn, Christopher W. Yu, Qiwei Pang, Rich Bialek, William Palmer, Stephanie E. ArXiv Article Maximum entropy methods provide a principled path connecting measurements of neural activity directly to statistical physics models, and this approach has been successful for populations of [Formula: see text] neurons. As [Formula: see text] increases in new experiments, we enter an undersampled regime where we have to choose which observables should be constrained in the maximum entropy construction. The best choice is the one that provides the greatest reduction in entropy, defining a “minimax entropy” principle. This principle becomes tractable if we restrict attention to correlations among pairs of neurons that link together into a tree; we can find the best tree efficiently, and the underlying statistical physics models are exactly solved. We use this approach to analyze experiments on [Formula: see text] neurons in the mouse hippocampus, and show that the resulting model captures the distribution of synchronous activity in the network. Cornell University 2023-10-16 /pmc/articles/PMC10614989/ /pubmed/37904743 Text en https://creativecommons.org/licenses/by/4.0/This work is licensed under a Creative Commons Attribution 4.0 International License (https://creativecommons.org/licenses/by/4.0/) , which allows reusers to distribute, remix, adapt, and build upon the material in any medium or format, so long as attribution is given to the creator. The license allows for commercial use. |
spellingShingle | Article Lynn, Christopher W. Yu, Qiwei Pang, Rich Bialek, William Palmer, Stephanie E. Exactly solvable statistical physics models for large neuronal populations |
title | Exactly solvable statistical physics models for large neuronal populations |
title_full | Exactly solvable statistical physics models for large neuronal populations |
title_fullStr | Exactly solvable statistical physics models for large neuronal populations |
title_full_unstemmed | Exactly solvable statistical physics models for large neuronal populations |
title_short | Exactly solvable statistical physics models for large neuronal populations |
title_sort | exactly solvable statistical physics models for large neuronal populations |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10614989/ https://www.ncbi.nlm.nih.gov/pubmed/37904743 |
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