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Permanent draft genome sequence of Bradyrhizobium vignae, strain ISRA 400, an elite nitrogen-fixing bacterium, isolated from the groundnut growing area in Senegal
A new Bradyrhizobium vignae strain called ISRA400 was isolated from groundnut (Arachis hypogaea L.) root nodules obtained by trapping the bacteria from soil samples collected in the Senegalese groundnut basin. In this study, we present the draft genome sequence of this strain ISRA400, which spans ap...
Autores principales: | , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Ivyspring International Publisher
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10615618/ https://www.ncbi.nlm.nih.gov/pubmed/37915957 http://dx.doi.org/10.7150/jgen.88302 |
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author | NIANG, Diariatou GUEDDOU, Abdellatif NIANG, Nogaye NZEPANG, Darius SAMBOU, Aissatou DIOUF, Adama ZAIYA, Arlette Z CISSOKO, Maimouna GULLY, Djamel NGUEPJOP, Joel-Romaric SVISTOONOFF, Sergio FONCEKA, Daniel HOCHER, Valérie DIOUF, Diégane FALL, Saliou TISA, Louis S. |
author_facet | NIANG, Diariatou GUEDDOU, Abdellatif NIANG, Nogaye NZEPANG, Darius SAMBOU, Aissatou DIOUF, Adama ZAIYA, Arlette Z CISSOKO, Maimouna GULLY, Djamel NGUEPJOP, Joel-Romaric SVISTOONOFF, Sergio FONCEKA, Daniel HOCHER, Valérie DIOUF, Diégane FALL, Saliou TISA, Louis S. |
author_sort | NIANG, Diariatou |
collection | PubMed |
description | A new Bradyrhizobium vignae strain called ISRA400 was isolated from groundnut (Arachis hypogaea L.) root nodules obtained by trapping the bacteria from soil samples collected in the Senegalese groundnut basin. In this study, we present the draft genome sequence of this strain ISRA400, which spans approximatively 7.9 Mbp and exhibits a G+C content of 63.4%. The genome analysis revealed the presence of 48 tRNA genes and one rRNA operon (16S, 23S, and 5S). The nodulation test revealed that this strain ISRA400 significantly improves the nodulation parameters and chlorophyll content of the Arachis hypogaea variety Fleur11. These findings suggest the potential of Bradyrhizobium vignae strain ISRA400 as an effective symbiotic partner for improving the growth and productivity of groundnut crop. |
format | Online Article Text |
id | pubmed-10615618 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Ivyspring International Publisher |
record_format | MEDLINE/PubMed |
spelling | pubmed-106156182023-11-01 Permanent draft genome sequence of Bradyrhizobium vignae, strain ISRA 400, an elite nitrogen-fixing bacterium, isolated from the groundnut growing area in Senegal NIANG, Diariatou GUEDDOU, Abdellatif NIANG, Nogaye NZEPANG, Darius SAMBOU, Aissatou DIOUF, Adama ZAIYA, Arlette Z CISSOKO, Maimouna GULLY, Djamel NGUEPJOP, Joel-Romaric SVISTOONOFF, Sergio FONCEKA, Daniel HOCHER, Valérie DIOUF, Diégane FALL, Saliou TISA, Louis S. J Genomics Short Research Paper A new Bradyrhizobium vignae strain called ISRA400 was isolated from groundnut (Arachis hypogaea L.) root nodules obtained by trapping the bacteria from soil samples collected in the Senegalese groundnut basin. In this study, we present the draft genome sequence of this strain ISRA400, which spans approximatively 7.9 Mbp and exhibits a G+C content of 63.4%. The genome analysis revealed the presence of 48 tRNA genes and one rRNA operon (16S, 23S, and 5S). The nodulation test revealed that this strain ISRA400 significantly improves the nodulation parameters and chlorophyll content of the Arachis hypogaea variety Fleur11. These findings suggest the potential of Bradyrhizobium vignae strain ISRA400 as an effective symbiotic partner for improving the growth and productivity of groundnut crop. Ivyspring International Publisher 2023-11-01 /pmc/articles/PMC10615618/ /pubmed/37915957 http://dx.doi.org/10.7150/jgen.88302 Text en © The author(s) https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/). See http://ivyspring.com/terms for full terms and conditions. |
spellingShingle | Short Research Paper NIANG, Diariatou GUEDDOU, Abdellatif NIANG, Nogaye NZEPANG, Darius SAMBOU, Aissatou DIOUF, Adama ZAIYA, Arlette Z CISSOKO, Maimouna GULLY, Djamel NGUEPJOP, Joel-Romaric SVISTOONOFF, Sergio FONCEKA, Daniel HOCHER, Valérie DIOUF, Diégane FALL, Saliou TISA, Louis S. Permanent draft genome sequence of Bradyrhizobium vignae, strain ISRA 400, an elite nitrogen-fixing bacterium, isolated from the groundnut growing area in Senegal |
title | Permanent draft genome sequence of Bradyrhizobium vignae, strain ISRA 400, an elite nitrogen-fixing bacterium, isolated from the groundnut growing area in Senegal |
title_full | Permanent draft genome sequence of Bradyrhizobium vignae, strain ISRA 400, an elite nitrogen-fixing bacterium, isolated from the groundnut growing area in Senegal |
title_fullStr | Permanent draft genome sequence of Bradyrhizobium vignae, strain ISRA 400, an elite nitrogen-fixing bacterium, isolated from the groundnut growing area in Senegal |
title_full_unstemmed | Permanent draft genome sequence of Bradyrhizobium vignae, strain ISRA 400, an elite nitrogen-fixing bacterium, isolated from the groundnut growing area in Senegal |
title_short | Permanent draft genome sequence of Bradyrhizobium vignae, strain ISRA 400, an elite nitrogen-fixing bacterium, isolated from the groundnut growing area in Senegal |
title_sort | permanent draft genome sequence of bradyrhizobium vignae, strain isra 400, an elite nitrogen-fixing bacterium, isolated from the groundnut growing area in senegal |
topic | Short Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10615618/ https://www.ncbi.nlm.nih.gov/pubmed/37915957 http://dx.doi.org/10.7150/jgen.88302 |
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