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IMF deposition ceRNA network analysis and functional study of HIF1a in yak
The concentration of intramuscular fat (IMF) is a crucial determinant of yak meat quality. However, the molecular mechanisms that regulate IMF in yak remain largely elusive. In our study, we conducted transcriptome sequencing on the longissimus dorsi muscle tissues of yaks with varying IMF contents....
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10616239/ https://www.ncbi.nlm.nih.gov/pubmed/37915947 http://dx.doi.org/10.3389/fvets.2023.1272238 |
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author | Luo, Mengning Wang, Hui Zhang, Jun Yixi, Kangzhu Shu, Shi Fu, Changqi Zhong, Jincheng Peng, Wei |
author_facet | Luo, Mengning Wang, Hui Zhang, Jun Yixi, Kangzhu Shu, Shi Fu, Changqi Zhong, Jincheng Peng, Wei |
author_sort | Luo, Mengning |
collection | PubMed |
description | The concentration of intramuscular fat (IMF) is a crucial determinant of yak meat quality. However, the molecular mechanisms that regulate IMF in yak remain largely elusive. In our study, we conducted transcriptome sequencing on the longissimus dorsi muscle tissues of yaks with varying IMF contents. We then filtered differentially expressed genes (DEGs), microRNAs (DEMs), and long non-coding RNAs (DELs) to elucidate potential regulatory pathways of adipogenesis in yaks. Overall, our research sheds light on an array of potential mRNAs and noncoding RNAs implicated in IMF deposition and elaborates on the role of HIF1α in yaks. These findings contribute valuable insights that can serve as a guide for further research into the molecular mechanisms governing IMF deposition. |
format | Online Article Text |
id | pubmed-10616239 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-106162392023-11-01 IMF deposition ceRNA network analysis and functional study of HIF1a in yak Luo, Mengning Wang, Hui Zhang, Jun Yixi, Kangzhu Shu, Shi Fu, Changqi Zhong, Jincheng Peng, Wei Front Vet Sci Veterinary Science The concentration of intramuscular fat (IMF) is a crucial determinant of yak meat quality. However, the molecular mechanisms that regulate IMF in yak remain largely elusive. In our study, we conducted transcriptome sequencing on the longissimus dorsi muscle tissues of yaks with varying IMF contents. We then filtered differentially expressed genes (DEGs), microRNAs (DEMs), and long non-coding RNAs (DELs) to elucidate potential regulatory pathways of adipogenesis in yaks. Overall, our research sheds light on an array of potential mRNAs and noncoding RNAs implicated in IMF deposition and elaborates on the role of HIF1α in yaks. These findings contribute valuable insights that can serve as a guide for further research into the molecular mechanisms governing IMF deposition. Frontiers Media S.A. 2023-10-17 /pmc/articles/PMC10616239/ /pubmed/37915947 http://dx.doi.org/10.3389/fvets.2023.1272238 Text en Copyright © 2023 Luo, Wang, Zhang, Yixi, Shu, Fu, Zhong and Peng. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Veterinary Science Luo, Mengning Wang, Hui Zhang, Jun Yixi, Kangzhu Shu, Shi Fu, Changqi Zhong, Jincheng Peng, Wei IMF deposition ceRNA network analysis and functional study of HIF1a in yak |
title | IMF deposition ceRNA network analysis and functional study of HIF1a in yak |
title_full | IMF deposition ceRNA network analysis and functional study of HIF1a in yak |
title_fullStr | IMF deposition ceRNA network analysis and functional study of HIF1a in yak |
title_full_unstemmed | IMF deposition ceRNA network analysis and functional study of HIF1a in yak |
title_short | IMF deposition ceRNA network analysis and functional study of HIF1a in yak |
title_sort | imf deposition cerna network analysis and functional study of hif1a in yak |
topic | Veterinary Science |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10616239/ https://www.ncbi.nlm.nih.gov/pubmed/37915947 http://dx.doi.org/10.3389/fvets.2023.1272238 |
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